RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SETD7Q8WTS6 366 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 USP7Q93009 1102 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 UBE2E3Q969T4 207 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 ZUFSPQ96AP4 578 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 CMTM7Q96FZ5 175 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 MSANTD3Q96H12 275 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CDK15Q96Q40 435 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 OSBPL6Q9BZF3 934 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 DPY30Q9C005 99 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 OR2AG1Q9H205 316 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 VCXQ9H320 206 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 RMI1Q9H9A7 625 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TRPV5Q9NQA5 729 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PHPT1Q9NRX4 125 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 CLDND1Q9NY35 253 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TMEM181Q9P2C4 612 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 NKX1-2Q9UD57 310 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 PSMD13Q9UNM6 376 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 ITM2BQ9Y287 266 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PCDHGA11Q9Y5H2 935 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 GBF1Q92538 1859 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 HTTP42858 3142 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 NPIPB8E9PQR5 432 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 RFXAPO00287 272 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 ARNTLO00327 626 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 FBP2O00757 339 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 KMOO15229 486 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 PI15O43692 258 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 SGTAO43765 313 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 TBX10O75333 385 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 KELP23276 732 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 JAK1P23458 1154 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 PRPH2P23942 346 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 GDF5P43026 501 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 CTSCP53634 463 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 SESN3P58005 492 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 MRPS21P82921 87 aaKnown RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 GRSF1Q12849 480 aaKnown RBP eCLIP10.84□□□□□ -0.67
SKA2-204ENST00000578519 CHIT1Q13231 466 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 RCAN2Q14206 197 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 INPP5AQ14642 412 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 ABRAXAS2Q15018 415 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 C18orf21Q32NC0 220 aaPredicted RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 VPS26BQ4G0F5 336 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 AGTRAPQ6RW13 159 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 KBTBD6Q86V97 674 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 AMZ2Q86W34 360 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 THOC6Q86W42 341 aaKnown RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 RALGPS2Q86X27 583 aaPredicted RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 FUNDC1Q8IVP5 155 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 BEND7Q8N7W2 519 aaPredicted RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 OR9A1PQ8NGU1 263 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 RAD51AP1Q96B01 352 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 RMND5AQ9H871 391 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 ACSL5Q9ULC5 683 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 CNOT6Q9ULM6 557 aaKnown RBP10.84□□□□□ -0.67
SKA2-204ENST00000578519 COQ6Q9Y2Z9 468 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 RNF11Q9Y3C5 154 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 ST14Q9Y5Y6 855 aa10.84□□□□□ -0.67
SKA2-204ENST00000578519 E7ENX8 843 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 FFAR3O14843 346 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 MID1O15344 667 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 GPR42O15529 346 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PRMT3O60678 531 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 C1orf105O95561 183 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 HSD17B1P14061 328 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 GLULP15104 373 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 HOXB6P17509 224 aaKnown RBP10.83□□□□□ -0.68
SKA2-204ENST00000578519 PBLDP30039 288 aaPredicted RBP10.83□□□□□ -0.68
SKA2-204ENST00000578519 CASP2P42575 452 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 THOP1P52888 689 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 DIO3P55073 304 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 NME5P56597 212 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 EEFSECP57772 596 aaKnown RBP10.83□□□□□ -0.68
SKA2-204ENST00000578519 RPL38P63173 70 aaKnown RBP10.83□□□□□ -0.68
SKA2-204ENST00000578519 NAE1Q13564 534 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 CCNIQ14094 377 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 CPSF6Q16630 551 aaKnown RBP eCLIP10.83□□□□□ -0.68
SKA2-204ENST00000578519 DPY19L1Q2PZI1 675 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 FBXO43Q4G163 708 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 SGO1Q5FBB7 561 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 XKR6Q5GH73 641 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PIP5KL1Q5T9C9 394 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 IRAK1BP1Q5VVH5 260 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 FRG2Q64ET8 278 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 GRHL2Q6ISB3 625 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 DHDDSQ86SQ9 333 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 SPATA24Q86W54 205 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 DHFR2Q86XF0 187 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PROSER1Q86XN7 944 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 VRK3Q8IV63 474 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 DPP10Q8N608 796 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 OR56A3Q8NH54 315 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms