RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SDHDO14521 159 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 OR4F21O95013 312 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 EPHA3P29320 983 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 FOXA1P55317 472 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 ERVPABLB-1P60509 514 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 SRP54P61011 504 aaKnown RBP18.05■□□□□ 0.48
PRKCA-203ENST00000578063 USP39Q53GS9 565 aaKnown RBP18.05■□□□□ 0.48
PRKCA-203ENST00000578063 FAM91A1Q658Y4 838 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 LETMD1Q6P1Q0 360 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 MILR1Q7Z6M3 343 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 SNX31Q8N9S9 440 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 OR4F6Q8NGB9 312 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 OR5K2Q8NHB8 316 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 OR52B2Q96RD2 323 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 KCNA7Q96RP8 456 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 ATG10Q9H0Y0 220 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 TRIT1Q9H3H1 467 aaKnown RBP18.05■□□□□ 0.48
PRKCA-203ENST00000578063 WDR55Q9H6Y2 383 aaPredicted RBP18.05■□□□□ 0.48
PRKCA-203ENST00000578063 PFDN4Q9NQP4 134 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 DGKBQ9Y6T7 804 aa18.05■□□□□ 0.48
PRKCA-203ENST00000578063 UBOX5O94941 541 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 EBLN1P0CF75 366 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 THEGLP0DJG4 465 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 RPL10P27635 214 aaKnown RBP18.04■□□□□ 0.48
PRKCA-203ENST00000578063 RPL6Q02878 288 aaKnown RBP18.04■□□□□ 0.48
PRKCA-203ENST00000578063 ALG11Q2TAA5 492 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 GALNTL6Q49A17 601 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 TBC1D21Q8IYX1 336 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 SLC22A18ASQ8N1D0 253 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 OR5AR1Q8NGP9 310 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 OR56A3Q8NH54 315 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 ACTRT2Q8TDY3 377 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 TSACCQ96A04 125 aaPredicted RBP18.04■□□□□ 0.48
PRKCA-203ENST00000578063 PYCR2Q96C36 320 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 PPP1R36Q96LQ0 422 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 MAGEB10Q96LZ2 347 aaPredicted RBP18.04■□□□□ 0.48
PRKCA-203ENST00000578063 CCT7Q99832 543 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 TRNAU1APQ9NX07 287 aaKnown RBP18.04■□□□□ 0.48
PRKCA-203ENST00000578063 TRPS1Q9UHF7 1281 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 PLEKHM1Q9Y4G2 1056 aa18.04■□□□□ 0.48
PRKCA-203ENST00000578063 GOLGA8QA0A0J9YX86 632 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 GOLGA8OA6NCC3 632 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 PDZK1P1A8MUH7 402 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 GOLGA8NF8WBI6 632 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 HOXA6P31267 233 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 NAE1Q13564 534 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 UAP1L1Q3KQV9 507 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 LSM12Q3MHD2 195 aaKnown RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 CDYL2Q8N8U2 506 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 CEP70Q8NHQ1 597 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ZNF480Q8WV37 535 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 EDAQ92838 391 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 C12orf66Q96MD2 445 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 SLC6A18Q96N87 628 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 CDK15Q96Q40 435 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 AASDHPPTQ9NRN7 309 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 SLC22A14Q9Y267 594 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 WDR37Q9Y2I8 494 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ST14Q9Y5Y6 855 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ANKRD12Q6UB98 2062 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 CCDC163A0A0D9SF12 145 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 SPTY2D1-AS1A0A0U1RR47 76 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 MEI4A8MW99 385 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 E9PBE3 544 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 KLHL41O60662 606 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 CAPN1P07384 714 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 HGFP14210 728 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 EPORP19235 508 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ITPKAP23677 461 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 HSD17B2P37059 387 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 TBCCQ15814 346 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 GGTA1PQ4G0N0 100 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 LACTB2Q53H82 288 aaPredicted RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 WASH2PQ6VEQ5 465 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 RD3Q7Z3Z2 195 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 THOC6Q86W42 341 aaKnown RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 DCP2Q8IU60 420 aaKnown RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 SYTL1Q8IYJ3 562 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 DCBLD1Q8N8Z6 715 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 METTL6Q8TCB7 284 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 MED8Q96G25 268 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 KLHDC7BQ96G42 594 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ACTR8Q9H981 624 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 WASH6PQ9NQA3 447 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 SPATA7Q9P0W8 599 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 INVSQ9Y283 1065 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 TIMM22Q9Y584 194 aa18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ZFC3H1O60293 1989 aaKnown RBP18.03■□□□□ 0.48
PRKCA-203ENST00000578063 ZNF839A8K0R7 811 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 PIP5K1BO14986 540 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 VPS4BO75351 444 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 RASGRP1O95267 797 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 CLDN9O95484 217 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 TNFP01375 233 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 AOC1P19801 751 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 HMOX2P30519 316 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 HALP42357 657 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 PNLIPRP1P54315 467 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 CTBSQ01459 385 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms