RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 ZNF28P17035 718 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 PGAM1P18669 254 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 ARNTP27540 789 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 PKLRP30613 574 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 ITGA1P56199 1179 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
NDE1-211ENST00000576502 CDC20Q12834 499 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 DNASE1L3Q13609 305 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 TBR1Q16650 682 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 RNASEH2BQ5TBB1 312 aaKnown RBP13.38□□□□□ -0.27
NDE1-211ENST00000576502 TMEM135Q86UB9 458 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 UNC5BQ8IZJ1 945 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 C19orf47Q8N9M1 422 aaKnown RBP13.38□□□□□ -0.27
NDE1-211ENST00000576502 LKAAEAR1Q8TD35 194 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 C17orf62Q9BQA9 187 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 DPH2Q9BQC3 489 aaPredicted RBP13.38□□□□□ -0.27
NDE1-211ENST00000576502 FAM114A2Q9NRY5 505 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
NDE1-211ENST00000576502 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 CRYL1Q9Y2S2 319 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 AP1M2Q9Y6Q5 423 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 SEC16AO15027 2179 aa13.38□□□□□ -0.27
NDE1-211ENST00000576502 ZNF839A8K0R7 811 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 NTRK1P04629 796 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 PRKAR1AP10644 381 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 WT1P19544 449 aaPredicted RBP13.37□□□□□ -0.27
NDE1-211ENST00000576502 MAGEA3P43357 314 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 DR1Q01658 176 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 LY6DQ14210 128 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 MORF4L2Q15014 288 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 CTSL3PQ5NE16 218 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 C16orf46Q6P387 395 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 VRK3Q8IV63 474 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 PDIK1LQ8N165 341 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 ZBTB2Q8N680 514 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
NDE1-211ENST00000576502 OR2L8Q8NGY9 312 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 DENND1AQ8TEH3 1009 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 MR1Q95460 341 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 BIRC8Q96P09 236 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 OR2A14Q96R47 310 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
NDE1-211ENST00000576502 IRAK4Q9NWZ3 460 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.37□□□□□ -0.27
NDE1-211ENST00000576502 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 POLHQ9Y253 713 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 SPTBP11277 2137 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 SPTA1P02549 2419 aa13.37□□□□□ -0.27
NDE1-211ENST00000576502 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 C9J4A7 227 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 CATP04040 527 aaKnown RBP13.36□□□□□ -0.27
NDE1-211ENST00000576502 AGXTP21549 392 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 CD9P21926 228 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 CYP4F2P78329 520 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 IZUMO3Q5VZ72 239 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 LRRC8EQ6NSJ5 796 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 PCSK4Q6UW60 755 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 NEK10Q6ZWH5 1172 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 KLHL7Q8IXQ5 586 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 CT55Q8WUE5 264 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 PPM1MQ96MI6 270 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 SPATA7Q9P0W8 599 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 TUBD1Q9UJT1 453 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 PLAGL1Q9UM63 463 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
NDE1-211ENST00000576502 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
NDE1-211ENST00000576502 FASNP49327 2511 aaKnown RBP13.36□□□□□ -0.27
NDE1-211ENST00000576502 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 NKX2-8O15522 239 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 NIPSNAP2O75323 286 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 CREG1O75629 220 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 OR2B3O76000 313 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 TIAF1O95411 115 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 C1orf105O95561 183 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 PRB1P04280 392 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 CD63P08962 238 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 ENO3P13929 434 aaPredicted RBP13.35□□□□□ -0.27
NDE1-211ENST00000576502 PVRP15151 417 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 HSD17B2P37059 387 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 LINC00303Q3SY05 128 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 ZC3H12BQ5HYM0 836 aaKnown RBP13.35□□□□□ -0.27
NDE1-211ENST00000576502 SPANXN3Q5MJ09 141 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 TLDC1Q6P9B6 456 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 CENPUQ71F23 418 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 KCNMB4Q86W47 210 aa13.35□□□□□ -0.27
NDE1-211ENST00000576502 CREG2Q8IUH2 290 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms