RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BTN3A1O00481 513 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC16A5O15375 505 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PIAS1O75925 651 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 INHBAP08476 426 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 CHRM5P08912 532 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 HIST1H2AGP0C0S8 130 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 HIST1H2ADP20671 130 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PKLRP30613 574 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 BDKRB1P46663 353 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 SEPHS1P49903 392 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PMS2P54278 862 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 RAB15P59190 212 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 ERVPABLB-1P60509 514 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 USP10Q14694 798 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 C16orf72Q14CZ0 275 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 UAP1Q16222 522 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 ANKS6Q68DC2 871 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 UBE2R2Q712K3 238 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 TAOK1Q7L7X3 1001 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 OR9A1PQ8NGU1 263 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 HIST1H2AHQ96KK5 128 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZNF578Q96N58 590 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 GPR22Q99680 433 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 OLFM1Q99784 485 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 HIST1H2AJQ99878 128 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 MCMBPQ9BTE3 642 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 H2AFJQ9BTM1 129 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 GPAMQ9HCL2 828 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 C1GALT1Q9NS00 363 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PISDQ9UG56 409 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 POMT2Q9UKY4 750 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PLAGL1Q9UM63 463 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 RUVBL2Q9Y230 463 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
TRAPPC1-206ENST00000573989 EFCAB7A8K855 629 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ARHGEF33A8MVX0 844 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ISM1B1AKI9 464 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 B4E171 279 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 GFYI3L273 518 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 BRINP1O60477 761 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TNFSF15O95150 251 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 FKBP9O95302 570 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZBTB11O95625 1053 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 C1QAP02745 245 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ABHD2P08910 425 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 PRDX3P30048 256 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TSPAN7P41732 249 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 MSH2P43246 934 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 MAPK10P53779 464 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TAS2R39P59534 338 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 HSD11B2P80365 405 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 CYP4F3Q08477 520 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ARHGAP19Q14CB8 494 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TMTC4Q5T4D3 741 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 SPESP1Q6UW49 350 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 CYHR1Q6ZMK1 362 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 PIWIL4Q7Z3Z4 852 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 CCDC91Q7Z6B0 441 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 KLHL6Q8WZ60 621 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ANKRD7Q92527 254 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TEFMQ96QE5 360 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 TAAR9Q96RI9 348 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 MAP3K3Q99759 626 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ASPSCR1Q9BZE9 553 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 B3GNT4Q9C0J1 378 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 PARVBQ9HBI1 364 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 INTS7Q9NVH2 962 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 SOHLH2Q9NX45 425 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 ACTR10Q9NZ32 417 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-206ENST00000573989 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 C1QTNF9BB2RNN3 333 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 MYO1CO00159 1063 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 AGRPO00253 132 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 KRT38O76015 456 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 ENO2P09104 434 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 C1QTNF9P0C862 333 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 HGFP14210 728 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 CRABP2P29373 138 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 SERPINB9P50453 376 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 RAB10P61026 200 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 ACY1Q03154 408 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 FOXM1Q08050 763 aa12.35□□□□□ -0.43
TRAPPC1-206ENST00000573989 NAA25Q14CX7 972 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms