RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CHST8Q9H2A9 424 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 SYTL2Q9HCH5 934 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
SMG6-212ENST00000573153 OR6C2Q9NZP2 312 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 MED16Q9Y2X0 877 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 GOLGA6L10A0A0M3HER8 536 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 MAGEB16A2A368 324 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 KRT87PA6NCN2 255 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 TMEM150CB9EJG8 249 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 GOLGA8KD6RF30 607 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 GOLGA8TH3BQL2 631 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 SLC28A2O43868 658 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 PDGFAP04085 211 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 F7P08709 466 aaPredicted RBP16.71■□□□□ 0.27
SMG6-212ENST00000573153 SFTPCP11686 197 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 PTPN4P29074 926 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 ARL4DP49703 201 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 HSPA14Q0VDF9 509 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 CCSMST1Q4G0I0 132 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 RNF187Q5TA31 235 aaPredicted RBP16.71■□□□□ 0.27
SMG6-212ENST00000573153 FAM69BQ5VUD6 431 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 MRNIPQ6NTE8 343 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 CENPUQ71F23 418 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 TMEM151BQ8IW70 566 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 FAM20CQ8IXL6 584 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 DENND1AQ8TEH3 1009 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 APOBEC4Q8WW27 367 aaKnown RBP16.71■□□□□ 0.27
SMG6-212ENST00000573153 SLCO2A1Q92959 643 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 ABHD17AQ96GS6 310 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 IL17FQ96PD4 163 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 TRIM55Q9BYV6 548 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 GALPQ9UBC7 116 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 CIDEBQ9UHD4 219 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 GNPTGQ9UJJ9 305 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 NFS1Q9Y697 457 aa16.71■□□□□ 0.27
SMG6-212ENST00000573153 ZCWPW2A0A1B0GU75 182 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 FAM237BA0A1B0GVD1 139 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 MEN1O00255 615 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 KPNA5O15131 536 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 KDM1AO60341 852 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 KATNA1O75449 491 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 VAPBO95292 243 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 TCP1P17987 556 aaKnown RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 OGNP20774 298 aaKnown RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 VPS41P49754 854 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 UGT8Q16880 541 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 SLC5A12Q1EHB4 618 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 DEFB110Q30KQ9 67 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 TMTC4Q5T4D3 741 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 UNC5DQ6UXZ4 953 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 DNAJC22Q8N4W6 341 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 NAT8LQ8N9F0 302 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 SERPINB12Q96P63 405 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 PANX3Q96QZ0 392 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 GPR87Q9BY21 358 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 FAM117AQ9C073 453 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 TRMT1Q9NXH9 659 aaKnown RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 IL1RAPL1Q9NZN1 696 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 TDRKHQ9Y2W6 561 aaKnown RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 UBR5O95071 2799 aaPredicted RBP16.7■□□□□ 0.26
SMG6-212ENST00000573153 SEC16AO15027 2179 aa16.7■□□□□ 0.26
SMG6-212ENST00000573153 A0A0J9YY10 115 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 CDC14CA4D256 554 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 SDR42E2A6NKP2 422 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 NDUFS3O75489 264 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 APOA4P06727 396 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 CCNYL3P0C7X3 344 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 NR1D1P20393 614 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 RAB28P51157 221 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 PMS2P54278 862 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 TMED2Q15363 201 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 CPZQ66K79 652 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 SDCCAG8Q86SQ7 713 aaPredicted RBP16.69■□□□□ 0.26
SMG6-212ENST00000573153 APLFQ8IW19 511 aaPredicted RBP16.69■□□□□ 0.26
SMG6-212ENST00000573153 DCUN1D3Q8IWE4 304 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
SMG6-212ENST00000573153 TRIM4Q9C037 500 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 ENAMQ9NRM1 1142 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 PCYOX1Q9UHG3 505 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 POLHQ9Y253 713 aa16.69■□□□□ 0.26
SMG6-212ENST00000573153 ASH1LQ9NR48 2969 aaKnown RBP16.69■□□□□ 0.26
SMG6-212ENST00000573153 MYO18BQ8IUG5 2567 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 A0A1W2PPV9 198 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 H3BMM5 538 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 PFDN6O15212 129 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 ZNF185O15231 689 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 ZNF749O43361 778 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 NIPSNAP2O75323 286 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 DNAJB5O75953 348 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 RPN2P04844 631 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 RAB40ALP0C0E4 278 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 PAMP19021 973 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 ITGAXP20702 1163 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 TERF1P54274 439 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 KIR2DS3Q14952 304 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms