RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 MAP7Q14244 749 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 WHAMMP3Q1A5X7 153 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 LINC00303Q3SY05 128 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 PRAMEF17Q5VTA0 474 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 CYB5D1Q6P9G0 228 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 SPESP1Q6UW49 350 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 OTOAQ7RTW8 1153 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 CILP2Q8IUL8 1156 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 DENND6AQ8IWF6 608 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 CARFQ8N187 725 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
LITAF-208ENST00000571627 SKA2Q8WVK7 121 aaPredicted RBP14.08□□□□□ -0.16
LITAF-208ENST00000571627 ZNF501Q96CX3 271 aaPredicted RBP14.08□□□□□ -0.16
LITAF-208ENST00000571627 LRRC39Q96DD0 335 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 IL17FQ96PD4 163 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 TRAPPC9Q96Q05 1148 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 OR2A14Q96R47 310 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 EBNA1BP2Q99848 306 aaKnown RBP14.08□□□□□ -0.16
LITAF-208ENST00000571627 ERP44Q9BS26 406 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 PITPNM3Q9BZ71 974 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 TRIM31Q9BZY9 425 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 INTS10Q9NVR2 710 aaKnown RBP14.08□□□□□ -0.16
LITAF-208ENST00000571627 GALPQ9UBC7 116 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 CROTQ9UKG9 612 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 NFS1Q9Y697 457 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 FAM169AQ9Y6X4 670 aa14.08□□□□□ -0.16
LITAF-208ENST00000571627 H3BMM5 538 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 KPNA5O15131 536 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 NKX2-8O15522 239 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 RAD51CO43502 376 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 PKLRP30613 574 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 DLSTP36957 453 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 BDKRB1P46663 353 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 RPL21P46778 160 aaKnown RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 ADARP55265 1226 aaKnown RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 CALCOCO2Q13137 446 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 CTBP1Q13363 440 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 GRB7Q14451 532 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 TBR1Q16650 682 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 HIF1AQ16665 826 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 BBS9Q3SYG4 887 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 MSS51Q4VC12 460 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 ATP1A1-AS1Q5TC04 95 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 UNC5DQ6UXZ4 953 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 TAX1BP1Q86VP1 789 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 TMEM126BQ8IUX1 230 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 FAM20CQ8IXL6 584 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 C2orf73Q8N5S3 287 aaPredicted RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 LSM14AQ8ND56 463 aaKnown RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 FLVCR1-AS1Q8TAF5 88 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 GSDMBQ8TAX9 411 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 STARD8Q92502 1023 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 SLC45A3Q96JT2 553 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 MENTQ9BUN1 341 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 AKIRIN1Q9H9L7 192 aaPredicted RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 C20orf96Q9NUD7 363 aaPredicted RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 WHRNQ9P202 907 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 SNX24Q9Y343 169 aa14.07□□□□□ -0.16
LITAF-208ENST00000571627 UTP11Q9Y3A2 253 aaKnown RBP14.07□□□□□ -0.16
LITAF-208ENST00000571627 TLN1Q9Y490 2541 aaKnown RBP14.06□□□□□ -0.16
LITAF-208ENST00000571627 COL6A6A6NMZ7 2263 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 ZNF891A8MT65 544 aaPredicted RBP14.06□□□□□ -0.16
LITAF-208ENST00000571627 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 TMEM150CB9EJG8 249 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 TK2O00142 265 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 SCRG1O75711 98 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 S1PR4O95977 384 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 ESR1P03372 595 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 RPN2P04844 631 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 SLC1A2P43004 574 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 COL9A2Q14055 689 aaPredicted RBP14.06□□□□□ -0.16
LITAF-208ENST00000571627 CRYMQ14894 314 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 ZIC1Q15915 447 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 KYNUQ16719 465 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 DEFB110Q30KQ9 67 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 PLEKHS1Q5SXH7 462 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FAM199XQ6PEV8 388 aaPredicted RBP14.06□□□□□ -0.16
LITAF-208ENST00000571627 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 CDHR3Q6ZTQ4 885 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 EXD3Q8N9H8 876 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 C19orf47Q8N9M1 422 aaKnown RBP14.06□□□□□ -0.16
LITAF-208ENST00000571627 LINC01555Q8NAE3 123 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 SLC38A9Q8NBW4 561 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 OR1L3Q8NH93 324 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 CT55Q8WUE5 264 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 PWWP2AQ96N64 755 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FCRL4Q96PJ5 515 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 RUFY1Q96T51 708 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FAM167BQ9BTA0 163 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 RAB17Q9H0T7 212 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FANCEQ9HB96 536 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FAM60AQ9NP50 221 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 OR6C2Q9NZP2 312 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 FER1L5A0AVI2 2057 aa14.06□□□□□ -0.16
LITAF-208ENST00000571627 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms