RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ASZ1Q8WWH4 475 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 LRFN5Q96NI6 719 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 RUFY1Q96T51 708 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 CHST8Q9H2A9 424 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 ACTR5Q9H9F9 607 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 AKIRIN1Q9H9L7 192 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 CHRAC1Q9NRG0 131 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 BFARQ9NZS9 450 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 SERTAD3Q9UJW9 196 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 A0A0J9YY10 115 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 MEN1O00255 615 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 PRMT5O14744 637 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CD3EAPO15446 510 aaKnown RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 APOA4P06727 396 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CCR7P32248 378 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CXCR5P32302 372 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CCZ1BP86790 482 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CCZ1P86791 482 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CDK16Q00536 496 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 TLE1Q04724 770 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZNF789Q5FWF6 425 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 LCE2CQ5TA81 110 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 IZUMO3Q5VZ72 239 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 PTRHD1Q6GMV3 140 aaKnown RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZNF517Q6ZMY9 492 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CDHR3Q6ZTQ4 885 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 LDB1Q86U70 411 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 SYTL1Q8IYJ3 562 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC22A15Q8IZD6 547 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 DSELQ8IZU8 1212 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 MPP5Q8N3R9 675 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC38A9Q8NBW4 561 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 GSDMBQ8TAX9 411 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 THAP4Q8WY91 577 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 TCTN2Q96GX1 697 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 PCMTD2Q9NV79 361 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 MARCH4Q9P2E8 410 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 ANAPC2Q9UJX6 822 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 PLAGL1Q9UM63 463 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 SNX7Q9UNH6 387 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 FARSAQ9Y285 508 aaKnown RBP11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 PPP2R2CQ9Y2T4 447 aa11.95□□□□□ -0.5
CTDNEP1-205ENST00000570828 UBR5O95071 2799 aaPredicted RBP11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 IQCF5A8MTL0 148 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 ISM1B1AKI9 464 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 C9J4A7 227 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 NDUFS3O75489 264 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 HBQ1P09105 142 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAB40ALP0C0E4 278 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 TPSB2P20231 275 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 PKLRP30613 574 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 RORAP35398 523 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 KCNJ1P48048 391 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 NPY2RP49146 381 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAB28P51157 221 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 IL10RAQ13651 578 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 KIR2DS3Q14952 304 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 TPSAB1Q15661 275 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 UNC5DQ6UXZ4 953 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 DCUN1D3Q8IWE4 304 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 ENDOVQ8N8Q3 282 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 CFAP61Q8NHU2 1237 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 LKAAEAR1Q8TD35 194 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 PANX3Q96QZ0 392 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 DPH2Q9BQC3 489 aaPredicted RBP11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 AP1M1Q9BXS5 423 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 EPN3Q9H201 632 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 TREX1Q9NSU2 369 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 SPHK1Q9NYA1 384 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 GNPTGQ9UJJ9 305 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 TTC7AQ9ULT0 858 aaPredicted RBP11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 TP53TG5Q9Y2B4 290 aa11.94□□□□□ -0.5
CTDNEP1-205ENST00000570828 FAM181BA6NEQ2 426 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 PFDN6O15212 129 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZNF749O43361 778 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 GPC4O75487 556 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 OR2B3O76000 313 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 TPBGLP0DKB5 382 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 AGXTP21549 392 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 MGAT1P26572 445 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 NMBRP28336 390 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 CASRP41180 1078 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 VPS41P49754 854 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 TRIP13Q15645 432 aaPredicted RBP11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC5A12Q1EHB4 618 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 PTCHD3Q3KNS1 767 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 RNF187Q5TA31 235 aaPredicted RBP11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 MRNIPQ6NTE8 343 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 TCTN3Q6NUS6 607 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 LRRC8BQ6P9F7 803 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 FAM198BQ6UWH4 519 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 LRRC6Q86X45 466 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 VRK3Q8IV63 474 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 APLFQ8IW19 511 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms