RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PMPCBO75439 489 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 RASAL1O95294 804 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 LY6G6DO95868 133 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 HPP00738 406 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 TPOP07202 933 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 CHRM5P08912 532 aaPredicted RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 MAGP20916 626 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 CCNCP24863 283 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 MSX1P28360 303 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 PCK1P35558 622 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 GJC1P36383 396 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ARL4AP40617 200 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 IFI35P80217 286 aaPredicted RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 BOP1Q14137 746 aaKnown RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 PCOLCEQ15113 449 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 RBBP7Q16576 425 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 EMC4Q5J8M3 183 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 SIRPB2Q5JXA9 342 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ZNF468Q5VIY5 522 aaPredicted RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 CDKAL1Q5VV42 579 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 FRMPD2BQ6IN97 320 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 NEK10Q6ZWH5 1172 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 AMIGO1Q86WK6 493 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ZNF227Q86WZ6 799 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 PSTKQ8IV42 348 aaKnown RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 BBS5Q8N3I7 341 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 SLC25A41Q8N5S1 370 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 PLD5Q8N7P1 536 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 LINC01555Q8NAE3 123 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 MDS2Q8NDY4 140 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ZFPM2Q8WW38 1151 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 CCDC34Q96HJ3 373 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 OXNAD1Q96HP4 312 aaPredicted RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 RBM41Q96IZ5 413 aaKnown RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 MENTQ9BUN1 341 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 AP1M1Q9BXS5 423 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMG6-205ENST00000570659 SLC26A1Q9H2B4 701 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 HSD3B7Q9H2F3 369 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 TFB2MQ9H5Q4 396 aaKnown RBP6.87□□□□□ -1.31
SMG6-205ENST00000570659 COG4Q9H9E3 785 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 KLHL1Q9NR64 748 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 PARVAQ9NVD7 372 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 EURLQ9NYK6 297 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 LRFN1Q9P244 771 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 ST6GALNAC2Q9UJ37 374 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 DNPEPQ9ULA0 475 aa6.87□□□□□ -1.31
SMG6-205ENST00000570659 SCN2AQ99250 2005 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 LOC105369274A0A096LPK9 316 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 IGHV1-45A0A0A0MS14 117 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 LOC102723532A0A0G2JNH3 316 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 A0A1B0GX78 115 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 A0A1W2PPR1 153 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 CTAG2O75638 210 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 PRAMEF1O95521 474 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 FTLP02792 175 aaPredicted RBP6.86□□□□□ -1.31
SMG6-205ENST00000570659 HBQ1P09105 142 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 SLC35G4P0C7Q5 338 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 VCLP18206 1134 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 PCSK6P29122 969 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 HMGCLP35914 325 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 PRKCIP41743 596 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 SMSP52788 366 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 XIAPP98170 497 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 CACNG1Q06432 222 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 PRKAA1Q13131 559 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 GTF2H3Q13889 308 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 GRB7Q14451 532 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
SMG6-205ENST00000570659 SYT16Q17RD7 645 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 BCL7AQ4VC05 210 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 SPINK14Q6IE38 97 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 CEP128Q6ZU80 1094 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 TAX1BP1Q86VP1 789 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 LIX1LQ8IVB5 337 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 MCATQ8IVS2 390 aaKnown RBP6.86□□□□□ -1.31
SMG6-205ENST00000570659 GPR135Q8IZ08 494 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 OR4N4Q8N0Y3 316 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 BEST3Q8N1M1 668 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 STT3BQ8TCJ2 826 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 NSMCE1Q8WV22 266 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 RAPGEF5Q92565 580 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 FATE1Q969F0 183 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 HDAC10Q969S8 669 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 FKBP10Q96AY3 582 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 FAF2Q96CS3 445 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 HDAC11Q96DB2 347 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 C10orf90Q96M02 699 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 IL17FQ96PD4 163 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 GPATCH1Q9BRR8 931 aaKnown RBP6.86□□□□□ -1.31
SMG6-205ENST00000570659 CRB3Q9BUF7 120 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 WDR54Q9H977 334 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 SYTL2Q9HCH5 934 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 CUTCQ9NTM9 273 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 TXLNGQ9NUQ3 528 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 PPT2Q9UMR5 302 aa6.86□□□□□ -1.31
SMG6-205ENST00000570659 RNF6Q9Y252 685 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms