RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TOR3AQ9H497 397 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GPATCH2LQ9NWQ4 482 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PPP2R3BQ9Y5P8 575 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SPIN1Q9Y657 262 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GLYATL1P3A0A0U1RQE8 302 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MAGEB17A8MXT2 336 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TLR4O00206 839 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SGCEO43556 437 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HIST1H2ABP04908 130 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ITGB1P05556 798 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MTM1Q13496 603 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF630Q2M218 657 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RNF212Q495C1 297 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 FBXO47Q5MNV8 452 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HECTD2Q5U5R9 776 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HIST3H2AQ7L7L0 130 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TTLL6Q8N841 843 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HIST1H2ACQ93077 130 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 S100A16Q96FQ6 103 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 IDI2Q9BXS1 227 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 CPVLQ9H3G5 476 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PRDM12Q9H4Q4 367 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF408Q9H9D4 720 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 FAM120CQ9NX05 1096 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NOCTQ9UK39 431 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SPATA31D1Q6ZQQ2 1576 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 NCF1BA6NI72 391 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 NCF1CA8MVU1 366 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 RPP40O75818 363 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GADD45GO95257 159 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 MSR1P21757 451 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SLC2A5P22732 501 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 HOXD10P28358 340 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GTF2E2P29084 291 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 PPP2R2BQ00005 443 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CSTF1Q05048 431 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 C2orf80Q0P641 193 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GK2Q14410 553 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 PROX2Q3B8N5 592 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GLT6D1Q7Z4J2 308 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GRAMD2AQ8IUY3 354 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 TNS4Q8IZW8 715 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 PLD5Q8N7P1 536 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 TTC9Q92623 222 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 AKT1S1Q96B36 256 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF350Q9GZX5 532 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 PPIL3Q9H2H8 161 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GLOD4Q9HC38 313 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ACOT13Q9NPJ3 140 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 DMAC2Q9NW81 257 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 TAS2R10Q9NYW0 307 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ALKQ9UM73 1620 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 FAM149AA5PLN7 773 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 M0R036 132 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 BCAS1O75363 584 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 RAD17O75943 681 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CKMT1AP12532 417 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 HPGDP15428 266 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 LPOP22079 712 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CPN2P22792 545 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ECHS1P30084 290 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZNHIT3Q15649 155 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ADCK2Q7Z695 626 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZC3H3Q8IXZ2 948 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SLC22A8Q8TCC7 542 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SNAPC3Q92966 411 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 BIRC7Q96CA5 298 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 KCTD12Q96CX2 325 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 POLR2J3Q9H1A7 115 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 AGO4Q9HCK5 861 aaKnown RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GLTPQ9NZD2 209 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SALL4Q9UJQ4 1053 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 FXYD6-FXYD2A0A087WZ82 144 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ALDH1A2O94788 518 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 TFAP2AP05549 437 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 HNRNPLP14866 589 aaKnown RBP eCLIP6.98□□□□□ -1.299e-8■□□□□ 9.2
CNOT1-216ENST00000569240 TYMPP19971 482 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CCR10P46092 362 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ACTC1P68032 377 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ACTA1P68133 377 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF33BQ06732 778 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 GRM3Q14832 879 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ARL6IP1Q15041 203 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 FSTL4Q6MZW2 842 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 MS4A15Q8N5U1 240 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CHDHQ8NE62 594 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 DNERQ8NFT8 737 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF675Q8TD23 568 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 STYXQ8WUJ0 223 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 PPM1MQ96MI6 270 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 CNTNAP3BQ96NU0 1288 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 VRK1Q99986 396 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 FXYD6Q9H0Q3 95 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ABCC13Q9NSE7 274 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 HCN4Q9Y3Q4 1203 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 RIC1Q4ADV7 1423 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 SNNO75324 88 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-216ENST00000569240 ZDHHC11BP0C7U3 371 aa6.98□□□□□ -1.29
CNOT1-216ENST00000569240 MYCLP1P12525 358 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms