RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 MPP5Q8N3R9 675 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 RAB42Q8N4Z0 105 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 TRIM58Q8NG06 486 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 CFAP61Q8NHU2 1237 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 ZNF778Q96MU6 729 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 NRTNQ99748 197 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 AP1M1Q9BXS5 423 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 CHRAC1Q9NRG0 131 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 INTS7Q9NVH2 962 aaKnown RBP16.05■□□□□ 0.16
CDR2-207ENST00000569045 GNPTGQ9UJJ9 305 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 SLC39A10Q9ULF5 831 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 SRPK3Q9UPE1 567 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 PCDHGA9Q9Y5G4 932 aaKnown RBP16.05■□□□□ 0.16
CDR2-207ENST00000569045 NBASA2RRP1 2371 aa16.05■□□□□ 0.16
CDR2-207ENST00000569045 SPTBP11277 2137 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 TMEM63AO94886 807 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 FGGP02679 453 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 ZSCAN5DPP0CG00 497 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 PTGIRP43119 386 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 SARNPP82979 210 aaKnown RBP16.04■□□□□ 0.16
CDR2-207ENST00000569045 CDK16Q00536 496 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 IGFBP7Q16270 282 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 ZNF662Q6ZS27 426 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 MED25Q71SY5 747 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 SDCCAG8Q86SQ7 713 aaPredicted RBP16.04■□□□□ 0.16
CDR2-207ENST00000569045 TMEM102Q8N9M5 508 aaPredicted RBP16.04■□□□□ 0.16
CDR2-207ENST00000569045 PROKR1Q8TCW9 393 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 DENND1AQ8TEH3 1009 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
CDR2-207ENST00000569045 IP6K3Q96PC2 410 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 NDC1Q9BTX1 674 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 RAB11FIP5Q9BXF6 653 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 TRIM55Q9BYV6 548 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 SPHK1Q9NYA1 384 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.04■□□□□ 0.16
CDR2-207ENST00000569045 NDOR1Q9UHB4 597 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 PLAGL1Q9UM63 463 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 PLCL2Q9UPR0 1127 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 ZNF451Q9Y4E5 1061 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 PCDHGB7Q9Y5F8 929 aa16.04■□□□□ 0.16
CDR2-207ENST00000569045 ZSCAN9O15535 394 aaPredicted RBP16.03■□□□□ 0.16
CDR2-207ENST00000569045 CEP104O60308 925 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 IGHEP01854 428 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 PKLRP30613 574 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 DCDP81605 110 aaKnown RBP16.03■□□□□ 0.16
CDR2-207ENST00000569045 CHAF1BQ13112 559 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 KYNUQ16719 465 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 MLIPQ5VWP3 458 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 CPZQ66K79 652 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 LCN10Q6JVE6 187 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 MRNIPQ6NTE8 343 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 RHBDD2Q6NTF9 364 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 FAM198BQ6UWH4 519 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 OTOAQ7RTW8 1153 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 EFCAB3Q8N7B9 438 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 GLIS1Q8NBF1 620 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 DLG3Q92796 817 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 FOPNLQ96NB1 174 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 FAM60AQ9NP50 221 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
CDR2-207ENST00000569045 SEC16AO15027 2179 aa16.03■□□□□ 0.16
CDR2-207ENST00000569045 TTLL8A6PVC2 850 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 K7EM74 188 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 PEX12O00623 359 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 GPC4O75487 556 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 SLCO2B1O94956 709 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 S1PR4O95977 384 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 CD9P21926 228 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 AOAHP28039 575 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 FOLR3P41439 243 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 SEMA3AQ14563 771 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
CDR2-207ENST00000569045 DEFB110Q30KQ9 67 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.16
CDR2-207ENST00000569045 C1orf189Q5VU69 101 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 LDB1Q86U70 411 aaPredicted RBP16.02■□□□□ 0.16
CDR2-207ENST00000569045 HPS6Q86YV9 775 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 ZNF655Q8N720 491 aaPredicted RBP16.02■□□□□ 0.16
CDR2-207ENST00000569045 ADAMTS17Q8TE56 1095 aa16.02■□□□□ 0.16
CDR2-207ENST00000569045 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.16
CDR2-207ENST00000569045 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 IQCF5A8MTL0 148 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 H3BMM5 538 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 KLHL41O60662 606 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 FKBP9O95302 570 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 CAPN1P07384 714 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 TPBGLP0DKB5 382 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 PAMP19021 973 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 OTX2P32243 289 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 CRADDP78560 199 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 SF1Q15637 639 aaKnown RBP16.01■□□□□ 0.15
CDR2-207ENST00000569045 ZIC1Q15915 447 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
CDR2-207ENST00000569045 COLEC12Q5KU26 742 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 VRK3Q8IV63 474 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 KRT222Q8N1A0 295 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 OR2L8Q8NGY9 312 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 MAGEC3Q8TD91 643 aa16.01■□□□□ 0.15
CDR2-207ENST00000569045 RAD51AP1Q96B01 352 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms