RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 OR5K3A6NET4 321 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 CPNE6O95741 557 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 SYF2O95926 243 aaKnown RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 MT-ND3P03897 115 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 ENO2P09104 434 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 HIST1H2AGP0C0S8 130 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 H2AFXP16104 143 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 KRT15P19012 456 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 HIST1H2ADP20671 130 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 PKLRP30613 574 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 CAPZBP47756 277 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 CFHR1Q03591 330 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 SPIDRQ14159 915 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 TSNQ15631 228 aaKnown RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 PHKG1Q16816 387 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 FAM83EQ2M2I3 478 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 WDR74Q6RFH5 385 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 SBSNQ6UWP8 590 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 OOSP2Q86WS3 158 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 CENPLQ8N0S6 344 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-224ENST00000568877 RAB42Q8N4Z0 105 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 KCTD4Q8WVF5 259 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 RSC1A1Q92681 617 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 NXNL1Q96CM4 212 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 HIST1H2AHQ96KK5 128 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 HIST1H2AJQ99878 128 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 H2AFJQ9BTM1 129 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 RAB11FIP5Q9BXF6 653 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 TRIM54Q9BYV2 358 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 RDH14Q9HBH5 336 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 NMRAL1Q9HBL8 299 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 HRASLS2Q9NWW9 162 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 SPATA7Q9P0W8 599 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 LNPEPQ9UIQ6 1025 aa16.24■□□□□ 0.19
COMMD4-224ENST00000568877 PABPN1LA6NDY0 278 aaKnown RBP16.23■□□□□ 0.19
COMMD4-224ENST00000568877 BTN3A3O00478 584 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 KLHL2O95198 593 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 COL6A2P12110 1019 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 CSF2RBP32927 897 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 PPP1R3AQ16821 1122 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 CDCP2Q5VXM1 449 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ARMC6Q6NXE6 501 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 LRIG3Q6UXM1 1119 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ISCA2Q86U28 154 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ADGRF3Q8IZF5 1079 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 PLD6Q8N2A8 252 aaKnown RBP16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ACMSDQ8TDX5 336 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 DENND1AQ8TEH3 1009 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ADAMTS14Q8WXS8 1223 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 KIAA1191Q96A73 305 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 PTERQ96BW5 349 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 CCDC138Q96M89 665 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 IL17FQ96PD4 163 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 DPYSL5Q9BPU6 564 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 NUDT22Q9BRQ3 303 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 RAB33BQ9H082 229 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 ZMYND15Q9H091 742 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 EPHA6Q9UF33 1036 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 LGALS13Q9UHV8 139 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 CEP250Q9BV73 2442 aa16.23■□□□□ 0.19
COMMD4-224ENST00000568877 PCNX2A6NKB5 2137 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 A0A1W2PPM1 405 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 D6RAR5 112 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 SLC16A8O95907 504 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 CHRM5P08912 532 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-224ENST00000568877 HOXB3P14651 431 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-224ENST00000568877 POLR2CP19387 275 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-224ENST00000568877 TFEBP19484 476 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 HSD17B2P37059 387 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 AP1S2P56377 157 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 PRKAA1Q13131 559 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ARHGAP19Q14CB8 494 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ACAP2Q15057 778 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 OR4D1Q15615 310 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 CYP2A13Q16696 494 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 KRT71Q3SY84 523 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ANKS6Q68DC2 871 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 TMEM71Q6P5X7 295 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 FBXO38Q6PIJ6 1188 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
COMMD4-224ENST00000568877 FRA10AC1Q70Z53 315 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 TMPRSS9Q7Z410 1059 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 PLXDC1Q8IUK5 500 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 LINC01555Q8NAE3 123 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 OR2L8Q8NGY9 312 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 HMGCLL1Q8TB92 370 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ZDHHC12Q96GR4 267 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 GPR78Q96P69 363 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ALG9Q9H6U8 611 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 PCMTD2Q9NV79 361 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 ARL15Q9NXU5 204 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 OARD1Q9Y530 152 aa16.22■□□□□ 0.19
COMMD4-224ENST00000568877 GOLGA4Q13439 2230 aaKnown RBP16.21■□□□□ 0.19
COMMD4-224ENST00000568877 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
COMMD4-224ENST00000568877 CCDC189A1A4V9 331 aa16.21■□□□□ 0.19
COMMD4-224ENST00000568877 PIPSLA2A3N6 862 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms