RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 AGAP5A6NIR3 686 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 TNFRSF11BO00300 401 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 EIF3FO00303 357 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 TLL1O43897 1013 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 OR1I1O60431 355 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 WBP4O75554 376 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 TBX18O95935 607 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 GLUD1P00367 558 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 PSMA1P25786 263 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 SSTR4P31391 388 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 ST3GAL4Q11206 333 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 GTF2H2Q13888 395 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 NCF4Q15080 339 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 LRIT3Q3SXY7 679 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SMUG1Q53HV7 270 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 GTF2H2CQ6P1K8 395 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SLC22A15Q8IZD6 547 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 PIH1D2Q8WWB5 315 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 PYCR2Q96C36 320 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 PYURFQ96I23 114 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 TTPALQ9BTX7 342 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 TLR8Q9NR97 1041 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 FGF10O15520 208 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 KIAA0513O60268 411 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 JRKO75564 520 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 C9P02748 559 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SPNP16150 400 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 UQCRC1P31930 480 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 KRT20P35900 424 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 MAPK12P53778 367 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 CDC42P60953 191 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 GHRHRQ02643 423 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 ZNF181Q2M3W8 571 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 XAF1Q6GPH4 301 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 RRM2BQ7LG56 351 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 MUL1Q969V5 352 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 CCDC120Q96HB5 630 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SLC9A7Q96T83 725 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 DPH2Q9BQC3 489 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 GPR45Q9Y5Y3 372 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 F8W810 466 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 HRH2P25021 359 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 TIE1P35590 1138 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 OR1E2P47887 323 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 ATP4BP51164 291 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 BOP1Q14137 746 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 BTBD16Q32M84 506 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 INTS6LQ5JSJ4 861 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 AGAP6Q5VW22 663 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 CLDN19Q8N6F1 224 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 ZNF675Q8TD23 568 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 PHF10Q8WUB8 498 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 POF1BQ8WVV4 589 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 JPH3Q8WXH2 748 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 CDKN2AIPNLQ96HQ2 116 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 AGAP4Q96P64 663 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 TUBB1Q9H4B7 451 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 THUMPD1Q9NXG2 353 aaKnown RBP10.68□□□□□ -0.7
PALB2-206ENST00000568219 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 FKBPLQ9UIM3 349 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 VPS9D1Q9Y2B5 631 aa10.68□□□□□ -0.7
PALB2-206ENST00000568219 DLGAP1O14490 977 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 AREL1O15033 823 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ICMTO60725 284 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 EEDO75530 441 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 WEE1P30291 646 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 RRM2P31350 389 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 MAGEA12P43365 314 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 AKR1D1P51857 326 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 TUBA1BP68363 451 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 GANABQ14697 944 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 UGT3A2Q3SY77 523 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 USP39Q53GS9 565 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 KIAA1614Q5VZ46 1190 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 OR4F3Q6IEY1 312 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 FAM151BQ6UXP7 276 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CASP12Q6UXS9 341 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 TUBA1AQ71U36 451 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 B3GNT8Q7Z7M8 397 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 UHRF1Q96T88 793 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 SMOQ99835 787 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZSCAN5AQ9BUG6 496 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CLEC4MQ9H2X3 399 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 TFB2MQ9H5Q4 396 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 C11orf16Q9NQ32 467 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZIM2Q9NZV7 527 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 SSR3Q9UNL2 185 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms