RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ZNF574Q6ZN55 896 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-222ENST00000568034 USP53Q70EK8 1073 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 CCDC91Q7Z6B0 441 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 AMIGO1Q86WK6 493 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 ADGRF3Q8IZF5 1079 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 PLD6Q8N2A8 252 aaKnown RBP17.45■□□□□ 0.38
COMMD4-222ENST00000568034 OR9A1PQ8NGU1 263 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 OR10G6Q8NH81 332 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 WDR48Q8TAF3 677 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 KCTD4Q8WVF5 259 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 GPR78Q96P69 363 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 SYNDIG1Q9H7V2 258 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 SPATA7Q9P0W8 599 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 ACOT9Q9Y305 439 aa17.45■□□□□ 0.38
COMMD4-222ENST00000568034 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-222ENST00000568034 OR6C74A6NCV1 312 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 FOXO6A8MYZ6 492 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 RASGRF2O14827 1237 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 CPNE6O95741 557 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 TOP3BO95985 862 aaKnown RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 AMD1P17707 334 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 PEBP1P30086 187 aaKnown RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 SHMT2P34897 504 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 GFERP55789 205 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 ATP6V0D1P61421 351 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 OR4D1Q15615 310 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 TAF1BQ53T94 588 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 HES3Q5TGS1 186 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 MBOAT1Q6ZNC8 495 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 RAB44Q7Z6P3 723 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 CLEC14AQ86T13 490 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 TBC1D1Q86TI0 1168 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 SLITRK4Q8IW52 837 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 RIBC1Q8N443 379 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 FLVCR1-AS1Q8TAF5 88 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 MAGEC3Q8TD91 643 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 NXNL1Q96CM4 212 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 ZIM3Q96PE6 472 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 GFM1Q96RP9 751 aaKnown RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 RAB33BQ9H082 229 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 VPS11Q9H270 941 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 SRMSQ9H3Y6 488 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 PARVBQ9HBI1 364 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 EPHA6Q9UF33 1036 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 LGALS13Q9UHV8 139 aa17.44■□□□□ 0.38
COMMD4-222ENST00000568034 NOVA2Q9UNW9 492 aaKnown RBP17.44■□□□□ 0.38
COMMD4-222ENST00000568034 A0A1W2PPM1 405 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ZW10O43264 779 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 C9P02748 559 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 MPOP05164 745 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 LTA4HP09960 611 aaKnown RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 CYP2A7P20853 494 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 IMPA1P29218 277 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 IFFO1Q0D2I5 559 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 SPIDRQ14159 915 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 FASTKQ14296 549 aaKnown RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 CYP2A13Q16696 494 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ZXDCQ2QGD7 858 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 N4BP2L1Q5TBK1 243 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 TTC23LQ6PF05 361 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 FBXO38Q6PIJ6 1188 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 SH2D5Q6ZV89 423 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 B3GNT8Q7Z7M8 397 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ADAMTSL2Q86TH1 951 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ISCA2Q86U28 154 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 OOSP2Q86WS3 158 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 OR2L8Q8NGY9 312 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 HMGCLL1Q8TB92 370 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 NCSTNQ92542 709 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 KIAA1191Q96A73 305 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 AHCYL2Q96HN2 611 aaKnown RBP17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ABCG4Q9H172 646 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ZNF358Q9NW07 568 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 HRASLS2Q9NWW9 162 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 SPHK1Q9NYA1 384 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 OR6C2Q9NZP2 312 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 PDP2Q9P2J9 529 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 TLK1Q9UKI8 766 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 ANKRD12Q6UB98 2062 aa17.43■□□□□ 0.38
COMMD4-222ENST00000568034 PTPRBP23467 1997 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 A0A1W2PPV9 198 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 CAPN5O15484 640 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 PRICKLE3O43900 615 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 KLHL2O95198 593 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 SLC16A8O95907 504 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 MT-CO3P00414 261 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 CHRM5P08912 532 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 ENO2P09104 434 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 THRAP10827 490 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 POLR2CP19387 275 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 MAP4P27816 1152 aaKnown RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 KCNC1P48547 511 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 ZFP36L1Q07352 338 aaKnown RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 TMEM71Q6P5X7 295 aa17.42■□□□□ 0.38
COMMD4-222ENST00000568034 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
COMMD4-222ENST00000568034 LRRC56Q8IYG6 542 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms