RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLC22A2O15244 555 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 FLRT2O43155 660 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 FOXS1O43638 330 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TLX2O43763 284 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 LPXNO60711 386 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PRAF2O60831 178 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF623O75123 536 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 GAS8O95995 478 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 KRT6BP04259 564 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PGK2P07205 417 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 DANCRP0C864 163 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 STAG3L1P0CL83 205 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 UNGP13051 313 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ATP6V1C1P21283 382 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 MARCKSP29966 332 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC6A12P48065 614 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 KRT6CP48668 564 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 LHX1P48742 406 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 CCT8P50990 548 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 UBE2HP62256 183 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 GUCY1B3Q02153 619 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 DPTQ07507 201 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 MAD2L1Q13257 205 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PLD1Q13393 1074 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 FOXE3Q13461 319 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 DDX39BQ13838 428 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 KRT31Q15323 416 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 CCDC152Q4G0S7 254 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 LACTB2Q53H82 288 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 CAVIN4Q5BKX8 364 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ENTPD8Q5MY95 495 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 GGNBP1Q5YKI7 109 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 MFSD12Q6NUT3 480 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ANKRD54Q6NXT1 300 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 NOTUMQ6P988 496 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 RBM44Q6ZP01 1051 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM26Q6ZUK4 368 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 HTR3DQ70Z44 454 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ERASQ7Z444 233 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ARHGAP22Q7Z5H3 698 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 POLNQ7Z5Q5 900 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PEG10Q86TG7 708 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ZC3HC1Q86WB0 502 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TMC8Q8IU68 726 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 KLHDC8AQ8IYD2 350 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ADGRF4Q8IZF3 695 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 DSELQ8IZU8 1212 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 APCDD1Q8J025 514 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ZCCHC7Q8N3Z6 543 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF276Q8N554 614 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 MIGA1Q8NAN2 632 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 OR13C2Q8NGS9 318 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 OR2T34Q8NGX1 318 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 OR4A16Q8NH70 328 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 VANGL1Q8TAA9 524 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 BBS10Q8TAM1 723 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 HMGCLL1Q8TB92 370 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 GANCQ8TET4 914 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 APBB2Q92870 758 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ESAMQ96AP7 390 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 OTULINQ96BN8 352 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 DAZAP1Q96EP5 407 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 C14orf79Q96F83 325 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 NAF1Q96HR8 494 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 OR6C1Q96RD1 312 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 CRAMP1Q96RY5 1269 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PCYT2Q99447 389 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ATG101Q9BSB4 218 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 C16orf70Q9BSU1 422 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 THAP7Q9BT49 309 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TM2D2Q9BX73 214 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC39A8Q9C0K1 460 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 NPFFR1Q9GZQ6 430 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 EGLN1Q9GZT9 426 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TFB2MQ9H5Q4 396 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM231Q9H6L2 316 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ECT2Q9H8V3 914 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ACTR8Q9H981 624 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ROPN1Q9HAT0 212 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 KCNMB3Q9NPA1 279 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ANKRD10Q9NXR5 420 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PTGFRNQ9P2B2 879 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 TRIM10Q9UDY6 481 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PCSK1NQ9UHG2 260 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 ABT1Q9ULW3 272 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 WNT6Q9Y6F9 365 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC30A1Q9Y6M5 507 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 STON1Q9Y6Q2 735 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 SPACA6W5XKT8 324 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 CHD1O14646 1710 aa3.22□□□□□ -1.89
HERPUD1-211ENST00000566550 PCF11O94913 1555 aaKnown RBP3.21□□□□□ -1.89
HERPUD1-211ENST00000566550 MYO15BQ96JP2 1530 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A1B0GWJ7 208 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC22A23A1A5C7 686 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GAGE12BA1L429 117 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 GAGE12HA6NDE8 117 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TRIM49BA6NDI0 452 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 ZSCAN5BA6NJL1 495 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 HEPACAM2A8MVW5 462 aa3.21□□□□□ -1.9
HERPUD1-211ENST00000566550 TO15178 435 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms