RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 NUP85Q9BW27 656 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 ARRDC1-AS1Q9H2J1 176 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 RRP7BPQ9NSQ0 103 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 GTSE1Q9NYZ3 720 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 NAALADL1Q9UQQ1 740 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 GPR52Q9Y2T5 361 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 CEP164Q9UPV0 1460 aa1.74□□□□□ -2.13
SMG1-212ENST00000566328 TOPBP1Q92547 1522 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 A0A1W2PR80 420 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 FAM220BPB1ANY3 271 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 H0Y9J4 135 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 HAT1O14929 419 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 GALR3O60755 368 aaPredicted RBP1.73□□□□□ -2.13
SMG1-212ENST00000566328 SEC24AO95486 1093 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 SPARCP09486 303 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 SLC2A2P11168 524 aaPredicted RBP1.73□□□□□ -2.13
SMG1-212ENST00000566328 FDPSP14324 419 aaKnown RBP1.73□□□□□ -2.13
SMG1-212ENST00000566328 ATP6V1B1P15313 513 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 CD300CQ08708 224 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 TNIP1Q15025 636 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 EFTUD2Q15029 972 aaKnown RBP eCLIP1.73□□□□□ -2.13
SMG1-212ENST00000566328 RARS2Q5T160 578 aaKnown RBP1.73□□□□□ -2.13
SMG1-212ENST00000566328 GRTP1Q5TC63 336 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 LCN1P1Q5VSP4 162 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 GDPGP1Q6ZNW5 385 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 CHMP1BQ7LBR1 199 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 HAUS6Q7Z4H7 955 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 PHC2Q8IXK0 858 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 KLHDC1Q8N7A1 406 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 TSPYL6Q8N831 410 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 KLHL30-AS1Q8NEE0 82 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 OR13C3Q8NGS6 347 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 TBC1D16Q8TBP0 767 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 GATAD1Q8WUU5 269 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 ST8SIA4Q92187 359 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 HTRA1Q92743 480 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 NECTIN4Q96NY8 510 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 NCAPGQ9BPX3 1015 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 MGME1Q9BQP7 344 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 CHCHD5Q9BSY4 110 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 PDCL3Q9H2J4 239 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 SPHK1Q9NYA1 384 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 CACNG4Q9UBN1 327 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.73□□□□□ -2.13
SMG1-212ENST00000566328 AMACRQ9UHK6 382 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 TNNQ9UQP3 1299 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 MTMR6Q9Y217 621 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 PPP2R2CQ9Y2T4 447 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 SLC6A5Q9Y345 797 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 WIPI2Q9Y4P8 454 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.73□□□□□ -2.13
SMG1-212ENST00000566328 LYVE1Q9Y5Y7 322 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 HCFC1P51610 2035 aa1.73□□□□□ -2.13
SMG1-212ENST00000566328 WDR62O43379 1518 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 TOP2AP11388 1531 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 ZNF840PA6NDX5 716 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 SRRM4A7MD48 611 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 SHISA9B4DS77 424 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 POLBP06746 335 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 XBP1P17861 261 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 NMBRP28336 390 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 ICAM3P32942 547 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 RPL21P46778 160 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 B3GALT5-AS1P59052 145 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 PPP2R2BQ00005 443 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 CEBPZQ03701 1054 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 DMPKQ09013 629 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 MS4A18Q3C1V0 323 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 SLC9C2Q5TAH2 1124 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 CES4AQ5XG92 561 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 TMEM207Q6UWW9 146 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 G2E3Q7L622 706 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 FAM131BQ86XD5 332 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 ARID3BQ8IVW6 561 aaPredicted RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 FRMD1Q8N878 549 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 METTL6Q8TCB7 284 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 ZKSCAN4Q969J2 545 aaPredicted RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 ATF6BQ99941 703 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 URM1Q9BTM9 101 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 C1QTNF1Q9BXJ1 281 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 ZNF701Q9NV72 531 aaPredicted RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 P4HTMQ9NXG6 502 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 NENFQ9UMX5 172 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 PA2G4Q9UQ80 394 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.72□□□□□ -2.13
SMG1-212ENST00000566328 ABCC8Q09428 1581 aa1.72□□□□□ -2.13
SMG1-212ENST00000566328 CUX1P39880 1505 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 RUSC2Q8N2Y8 1516 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 POLA1P09884 1462 aaPredicted RBP1.71□□□□□ -2.14
SMG1-212ENST00000566328 FGD5Q6ZNL6 1462 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 A0A087WWV3 80 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 NPIPB15A6NHN6 443 aaPredicted RBP1.71□□□□□ -2.14
SMG1-212ENST00000566328 H0YAE9 185 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 TGFB1I1O43294 461 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 CEACAM4O75871 244 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 PDHA2P29803 388 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 BSGP35613 385 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 PBX3P40426 434 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 NDPQ00604 133 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 PNRC1Q12796 327 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms