RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 EOMESO95936 686 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 GPALPP1Q8IXQ4 340 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SVOPLQ8N434 492 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 FAM156AQ8NDB6 213 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 EURLQ9NYK6 297 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF726A6NNF4 738 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 LINGO3P0C6S8 592 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF20P17024 532 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SPRYD7Q5W111 196 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ANKFN1Q8N957 763 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC13A3Q8WWT9 602 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 UFD1Q92890 307 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 TBL1XR1Q9BZK7 514 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF282Q9UDV7 671 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 MALT1Q9UDY8 824 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 ITGB1BP2Q9UKP3 347 aa13.36□□□□□ -0.27
CX3CL1-204ENST00000565912 YJEFN3A6XGL0 299 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PGAM2P15259 253 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 IDH3AP50213 366 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CRISP3P54108 245 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 TYSND1Q2T9J0 566 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 P4HA3Q7Z4N8 544 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 WDR26Q9H7D7 661 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PCDHGB5Q9Y5G0 923 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 OR14I1A6ND48 311 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 MID1O15344 667 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 TSPAN9O75954 239 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 MPIP34949 423 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CASRP41180 1078 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PLGLB1Q02325 96 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 KLF1Q13351 362 aaPredicted RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 SCAMP5Q8TAC9 235 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 GRHL3Q8TE85 626 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CNTN6Q9UQ52 1028 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 A0A1W2PRB8 838 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PCDH7O60245 1069 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CPNE3O75131 537 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 OR3A3P47888 321 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 OR3A2P47893 321 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PDE12Q6L8Q7 609 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 NAT14Q8WUY8 206 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC7A4O43246 635 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC1A2P43004 574 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 B3GNT4Q9C0J1 378 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 INTS10Q9NVR2 710 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 IFT172Q9UG01 1749 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PRAMEF33A0A0G2JMD5 474 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PDCD5O14737 125 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 PRAMEF10O60809 474 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 SLC6A9P48067 706 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 KCNJ5P48544 419 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CA9Q16790 459 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 CLEC4CQ8WTT0 213 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 TAS2R7Q9NYW3 318 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 GMEB2Q9UKD1 530 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF541Q9H0D2 1346 aa13.35□□□□□ -0.27
CX3CL1-204ENST00000565912 WNT9AO14904 365 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 OR7A10O76100 309 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 FUT4P22083 530 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 CXCR1P25024 350 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 ARCN1P48444 511 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 CLCN4P51793 760 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 DGLUCYQ7Z3D6 616 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 LRP10Q7Z4F1 713 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 C12orf4Q9NQ89 552 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 SERINC1Q9NRX5 453 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
CX3CL1-204ENST00000565912 ZNF639Q9UID6 485 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms