RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 APOBEC3BQ9UH17 382 aaKnown RBP18.24■□□□□ 0.51
COMMD4-213ENST00000565834 ZDHHC2Q9UIJ5 367 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 ANGPTL3Q9Y5C1 460 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 UBFD1O14562 309 aaKnown RBP18.23■□□□□ 0.51
COMMD4-213ENST00000565834 VILLO15195 856 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 JUNDP17535 347 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 SLC6A12P48065 614 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 C21orf59P57076 290 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 NXPH1P58417 271 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 PTCHD3Q3KNS1 767 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 SH2D4BQ5SQS7 431 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 DUS1LQ6P1R4 473 aaKnown RBP18.23■□□□□ 0.51
COMMD4-213ENST00000565834 AGTRAPQ6RW13 159 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 ABRAXAS1Q6UWZ7 409 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 LRRC70Q7Z2Q7 622 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 NRROSQ86YC3 692 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 KIRREL3Q8IZU9 778 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 TEX9Q8N6V9 391 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 FERD3LQ96RJ6 166 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 ATG10Q9H0Y0 220 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 SLC32A1Q9H598 525 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 ZBTB26Q9HCK0 441 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 MID1IP1Q9NPA3 183 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 DCTN4Q9UJW0 460 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 PCOLCE2Q9UKZ9 415 aa18.23■□□□□ 0.51
COMMD4-213ENST00000565834 TDRKHQ9Y2W6 561 aaKnown RBP18.23■□□□□ 0.51
COMMD4-213ENST00000565834 ATXN2Q99700 1313 aaKnown RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 IMPA1P29218 277 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 AVPR2P30518 371 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 PIK3CGP48736 1102 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CSNK1EP49674 416 aaKnown RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 RPE65Q16518 533 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 ZXDCQ2QGD7 858 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 PLK5Q496M5 336 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 RFWD2Q8NHY2 731 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 SEC16BQ96JE7 1060 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 MVB12BQ9H7P6 319 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 STK38LQ9Y2H1 464 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 HEBP2Q9Y5Z4 205 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 OR52A4PA6NMU1 304 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 PPP6CO00743 305 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 GIPC1O14908 333 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 HRO43593 1189 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 GPR37L1O60883 481 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 WDR47O94967 919 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CSF2P04141 144 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 MTHFD1P11586 935 aaKnown RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 NME1P15531 152 aaKnown RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 EPB42P16452 691 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 HK2P52789 917 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 SH3BP2P78314 561 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 PRKG2Q13237 762 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 KRT33BQ14525 404 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 TEAD4Q15561 434 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CEP68Q76N32 757 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 TAF8Q7Z7C8 310 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 SYTL1Q8IYJ3 562 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CACNA2D3Q8IZS8 1091 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 AFAP1L2Q8N4X5 818 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CCDC197Q8NCU1 140 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 AGAP11Q8TF27 550 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 NELL1Q92832 810 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 PYCR2Q96C36 320 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 ZNF382Q96SR6 550 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 SIKE1Q9BRV8 207 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 CAAP1Q9H8G2 361 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 NOL11Q9H8H0 719 aaKnown RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 IPPKQ9H8X2 491 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-213ENST00000565834 USH1CQ9Y6N9 552 aa18.22■□□□□ 0.51
COMMD4-213ENST00000565834 A0A0G2JND7 137 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 PRR5-ARHGAP8B1AHC4 643 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 EML2O95834 649 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 F3P13726 295 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 GNSP15586 552 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 CNR2P34972 360 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 NAE1Q13564 534 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 GRB7Q14451 532 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 ZNF528Q3MIS6 628 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 PRRT3Q5FWE3 981 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 GPRIN3Q6ZVF9 776 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 SNX31Q8N9S9 440 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 ATP6V1E2Q96A05 226 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 MED8Q96G25 268 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 LRRC61Q9BV99 259 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 TNFRSF12AQ9NP84 129 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 DNAJC11Q9NVH1 559 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 ZSCAN32Q9NX65 697 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 TAAR2Q9P1P5 351 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 POLG2Q9UHN1 485 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 PLAGL1Q9UM63 463 aa18.21■□□□□ 0.51
COMMD4-213ENST00000565834 A0A1B0GTW7 788 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 A6NCN8 305 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 TMEM233B4DJY2 109 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 SLCO1B7G3V0H7 640 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 KATNA1O75449 491 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 ESRRBO95718 433 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 OTCP00480 354 aa18.2■□□□□ 0.5
COMMD4-213ENST00000565834 ARL1P40616 181 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms