RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OLFM1Q99784 485 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CCDC77Q9BR77 488 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CCDC86Q9H6F5 360 aaKnown RBP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 POPDC3Q9HBV1 291 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 GPAMQ9HCL2 828 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 ACTR10Q9NZ32 417 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 PISDQ9UG56 409 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 PCDHGA8Q9Y5G5 932 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 NCOR2Q9Y618 2525 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 EFCAB7A8K855 629 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 GFYI3L273 518 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 RASGRF2O14827 1237 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 SLC16A5O15375 505 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 KIF1CO43896 1103 aaKnown RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 INHBAP08476 426 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 CHRM5P08912 532 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 ANKRD34CP0C6C1 535 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 FAM153BP0C7A2 387 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 MLLT3P42568 568 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 MSH2P43246 934 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 MAPK10P53779 464 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 KIR2DS3Q14952 304 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 KIF26BQ2KJY2 2108 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 FAM153CQ494X1 144 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 TMTC4Q5T4D3 741 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 LGSNQ5TDP6 509 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 ANKS6Q68DC2 871 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 CYB5D1Q6P9G0 228 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 UNQ6494/PRO21346Q6UXR6 183 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 RAPH1Q70E73 1250 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 TAOK1Q7L7X3 1001 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 PIWIL4Q7Z3Z4 852 aaKnown RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 PRSS42Q7Z5A4 293 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 KMT5CQ86Y97 462 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 OR2L8Q8NGY9 312 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 UHMK1Q8TAS1 419 aaKnown RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 PDLIM5Q96HC4 596 aaKnown RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 SLC46A1Q96NT5 459 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 GPR22Q99680 433 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 ANKZF1Q9H8Y5 726 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 C1GALT1Q9NS00 363 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 SLC39A1Q9NY26 324 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 SPATA7Q9P0W8 599 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-208ENST00000564703 CIDEBQ9UHD4 219 aa15.48■□□□□ 0.07
RAB40C-208ENST00000564703 ARHGEF33A8MVX0 844 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 POC1B-GALNT4F8VUJ3 575 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 FAM155BO75949 473 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 ZBTB11O95625 1053 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-208ENST00000564703 C1QAP02745 245 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 ITGA2BP08514 1039 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 TPBGLP0DKB5 382 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 HGFP14210 728 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 TNFRSF8P28908 595 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 PKLRP30613 574 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 KPNA2P52292 529 aaKnown RBP15.47■□□□□ 0.07
RAB40C-208ENST00000564703 HSD11B2P80365 405 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 ARHGAP19Q14CB8 494 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 C2orf73Q8N5S3 287 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-208ENST00000564703 FBXO15Q8NCQ5 510 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-208ENST00000564703 KLHL6Q8WZ60 621 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 ANKRD7Q92527 254 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 GATA6Q92908 595 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 TAAR9Q96RI9 348 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 MCMBPQ9BTE3 642 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 FUT8Q9BYC5 575 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 ZNF768Q9H5H4 540 aaKnown RBP15.47■□□□□ 0.07
RAB40C-208ENST00000564703 CAB39LQ9H9S4 337 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 PARVBQ9HBI1 364 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 THSD1Q9NS62 852 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 POMT2Q9UKY4 750 aa15.47■□□□□ 0.07
RAB40C-208ENST00000564703 IGHV5-51A0A0C4DH38 117 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 C1QTNF9BB2RNN3 333 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 BRINP1O60477 761 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 C1QTNF9P0C862 333 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 CCL4P13236 92 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 ZNF37AP17032 561 aaPredicted RBP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 NELFEP18615 380 aaKnown RBP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 CRABP2P29373 138 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SERPINB9P50453 376 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 RAB10P61026 200 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 PPP1CAP62136 330 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 FOXM1Q08050 763 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SP140Q13342 867 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 TSTA3Q13630 321 aaPredicted RBP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 GRB7Q14451 532 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 EFTUD2Q15029 972 aaKnown RBP eCLIP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SF1Q15637 639 aaKnown RBP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 CCSMST1Q4G0I0 132 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 DCAF12Q5T6F0 453 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 MROH9Q5TGP6 573 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 FBXO38Q6PIJ6 1188 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SPESP1Q6UW49 350 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 CEP97Q8IW35 865 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SYTL1Q8IYJ3 562 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 CCDC138Q96M89 665 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 ZNF578Q96N58 590 aaPredicted RBP15.46■□□□□ 0.07
RAB40C-208ENST00000564703 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 PKP4Q99569 1192 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms