RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FAM198BQ6UWH4 519 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 UNC5DQ6UXZ4 953 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF662Q6ZS27 426 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 GAS2L3Q86XJ1 694 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 MPP5Q8N3R9 675 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 DNAJC22Q8N4W6 341 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 FAM26EQ8N5C1 309 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 PPHLN1Q8NEY8 458 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 FLVCR1-AS1Q8TAF5 88 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 FER1L6-AS2Q96M78 137 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 EIF2B3Q9NR50 452 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ENAMQ9NRM1 1142 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 HOMER3Q9NSC5 361 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 INTS7Q9NVH2 962 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 C5AR2Q9P296 337 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ANKMY1Q9P2S6 941 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 GPN3Q9UHW5 284 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 MED13Q9UHV7 2174 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ISM1B1AKI9 464 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 DNAJB5O75953 348 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 S1PR4O95977 384 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PDGFAP04085 211 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 APRTP07741 180 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 TPBGLP0DKB5 382 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PIM1P11309 404 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 CCR7P32248 378 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PTGIRP43119 386 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 GABRA4P48169 554 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 ARSFP54793 590 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 CDK16Q00536 496 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 HSPA14Q0VDF9 509 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 BRD3Q15059 726 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 TMED2Q15363 201 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 YOD1Q5VVQ6 348 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 TTC23LQ6PF05 361 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF534Q76KX8 674 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 ZBTB2Q8N680 514 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 GALNT11Q8NCW6 608 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 GSDMBQ8TAX9 411 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 C1orf54Q8WWF1 131 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 DLG3Q92796 817 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PTERQ96BW5 349 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 GBP5Q96PP8 586 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 SMAD5Q99717 465 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 RAB11FIP5Q9BXF6 653 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 FAM60AQ9NP50 221 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 BFARQ9NZS9 450 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 PLAAQ9Y263 795 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 NAV2Q8IVL1 2488 aa11.75□□□□□ -0.53
GTF3C1-204ENST00000564664 MAST4O15021 2626 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 TARM1B6A8C7 271 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 PEX12O00623 359 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 PFDN6O15212 129 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CD3EAPO15446 510 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ZSCAN9O15535 394 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 VPS4BO75351 444 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 KLF7O75840 302 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ONECUT2O95948 504 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CD9P21926 228 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 RPS3P23396 243 aaKnown RBP eCLIP11.74□□□□□ -0.533e-6■■■□□ 17.1
GTF3C1-204ENST00000564664 AOAHP28039 575 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 PKLRP30613 574 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 GRIA1P42261 906 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 MLLT10P55197 1068 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.532e-7■■■□□ 19.1
GTF3C1-204ENST00000564664 SNX1Q13596 522 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ZIC1Q15915 447 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 PTCHD3Q3KNS1 767 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ZC3H12BQ5HYM0 836 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CPZQ66K79 652 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 DCUN1D3Q8IWE4 304 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 RAB42Q8N4Z0 105 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 SPC24Q8NBT2 197 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 OR2Y1Q8NGV0 311 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF778Q96MU6 729 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 TCF12Q99081 682 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 NRTNQ99748 197 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 NDC1Q9BTX1 674 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 SPRTNQ9H040 489 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 KLHL25Q9H0H3 589 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CHRAC1Q9NRG0 131 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CATSPERZQ9NTU4 200 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 TXLNGQ9NUQ3 528 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 SPHK1Q9NYA1 384 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 EURLQ9NYK6 297 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 NDOR1Q9UHB4 597 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms