RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 URGCPQ8TCY9 931 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 NEU4Q8WWR8 484 aaPredicted RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 PROX1Q92786 737 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ZNF566Q969W8 418 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 CIDECQ96AQ7 238 aaPredicted RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 HDAC11Q96DB2 347 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 MVB12AQ96EY5 273 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 FAM167AQ96KS9 214 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 RIPOR3Q96MK2 946 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ZNF560Q96MR9 790 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 AGAP4Q96P64 663 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 PPP1R2P1Q96PQ5 205 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 NEU1Q99519 415 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 SORT1Q99523 831 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 PRRX2Q99811 253 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 EBF4Q9BQW3 602 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 NTPCRQ9BSD7 190 aaKnown RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 SEZ6LQ9BYH1 1024 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 JMJD4Q9H9V9 463 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 VAT1LQ9HCJ6 419 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 AGPAT4Q9NRZ5 378 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.5□□□□□ -1.53
CHD9-210ENST00000564582 SCN3BQ9NY72 215 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 MAP3K20Q9NYL2 800 aaKnown RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 USE1Q9NZ43 259 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 PTTG3PQ9NZH4 202 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ADA2Q9NZK5 511 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ZIM2Q9NZV7 527 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 JKAMPQ9P055 326 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 MTRRQ9UBK8 725 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 WARS2Q9UGM6 360 aaKnown RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 TCEAL9Q9UHQ7 104 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 BAG5Q9UL15 447 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 CDC14AQ9UNH5 594 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 SNX7Q9UNH6 387 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 TPRKBQ9Y3C4 175 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 MTF2Q9Y483 593 aaPredicted RBP5.5□□□□□ -1.53
CHD9-210ENST00000564582 TIMM22Q9Y584 194 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 PCDHA1Q9Y5I3 950 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 ORC6Q9Y5N6 252 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 CSNK1G3Q9Y6M4 447 aa5.5□□□□□ -1.53
CHD9-210ENST00000564582 DHRS12A0PJE2 317 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 TMEM200CA6NKL6 621 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CLDN24A6NM45 220 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 MEI4A8MW99 385 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 PI4K2BG5E9Z4 385 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 UBXN8O00124 270 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 IFRD1O00458 451 aaPredicted RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 PSMD3O43242 534 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CST8O60676 142 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 SLC43A1O75387 559 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 SERPINI2O75830 405 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 PDE9AO76083 593 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CNTN5O94779 1100 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 DDHD2O94830 711 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 GABARAPO95166 117 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 SEC24AO95486 1093 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 NDST3O95803 873 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 LDLRP01130 860 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 TRIM49P0CI25 452 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 TRIM49CP0CI26 452 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CDH1P12830 882 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 ENO3P13929 434 aaPredicted RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 ZNF182P17025 639 aaPredicted RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 XRCC1P18887 633 aaPredicted RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 TFEBP19484 476 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 C4BPBP20851 252 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 KDELR1P24390 212 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 RYKP34925 604 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 IL12RB1P42701 662 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 MAGEA3P43357 314 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 MAGEA12P43365 314 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 RAD23AP54725 363 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 PEX3P56589 373 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 DNAJB13P59910 316 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 NOMO3P69849 1222 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 GABPAQ06546 454 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 BFSP2Q13515 415 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CEACAM7Q14002 265 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 STARD3Q14849 445 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 NRF1Q16656 503 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 TIMM50Q3ZCQ8 353 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 ZFP69Q49AA0 526 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 FBXO43Q4G163 708 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CDONQ4KMG0 1287 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 PRR16Q569H4 304 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 ESCO2Q56NI9 601 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 MDH1BQ5I0G3 518 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 TOR1AIP1Q5JTV8 583 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 VWA5B1Q5TIE3 1220 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 MEX3CQ5U5Q3 659 aaKnown RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 LIPMQ5VYY2 423 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 USP43Q70EL4 1123 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 CREB3L2Q70SY1 520 aa5.49□□□□□ -1.53
CHD9-210ENST00000564582 GET4Q7L5D6 327 aaPredicted RBP5.49□□□□□ -1.53
CHD9-210ENST00000564582 EFL1Q7Z2Z2 1120 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms