RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
CDR2-204ENST00000564542 CACNG1Q06432 222 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 AIMP2Q13155 320 aaKnown RBP13.58□□□□□ -0.24
CDR2-204ENST00000564542 SPARCL1Q14515 664 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 DBN1Q16643 649 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 TBC1D21Q8IYX1 336 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 ST6GALNAC3Q8NDV1 305 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 NACC2Q96BF6 587 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 NDC1Q9BTX1 674 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 ZBTB20Q9HC78 741 aaPredicted RBP13.58□□□□□ -0.24
CDR2-204ENST00000564542 ATP13A2Q9NQ11 1180 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 AGPAT4Q9NRZ5 378 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 IRAK4Q9NWZ3 460 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 PLCL2Q9UPR0 1127 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 MASP2O00187 686 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 QSOX1O00391 747 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 KDM1AO60341 852 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
CDR2-204ENST00000564542 FTH1P02794 183 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 GCGRP47871 477 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 GLRBP48167 497 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 ITIH4Q14624 930 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 KIR2DS3Q14952 304 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 KCTD11Q693B1 232 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 DARS2Q6PI48 645 aaKnown RBP13.57□□□□□ -0.24
CDR2-204ENST00000564542 PACS1Q6VY07 963 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 TMTC1Q8IUR5 882 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 DNAJC22Q8N4W6 341 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 PPP4R1Q8TF05 950 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 ELMO1Q92556 727 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 DLG3Q92796 817 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 FKBP10Q96AY3 582 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 FAM118BQ9BPY3 351 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 WDR77Q9BQA1 342 aaPredicted RBP13.57□□□□□ -0.24
CDR2-204ENST00000564542 OSBPL8Q9BZF1 889 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 SMARCAL1Q9NZC9 954 aa13.57□□□□□ -0.24
CDR2-204ENST00000564542 NOVA2Q9UNW9 492 aaKnown RBP13.57□□□□□ -0.24
CDR2-204ENST00000564542 TDRKHQ9Y2W6 561 aaKnown RBP13.57□□□□□ -0.24
CDR2-204ENST00000564542 AKR1B15C9JRZ8 316 aaPredicted RBP13.56□□□□□ -0.24
CDR2-204ENST00000564542 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
CDR2-204ENST00000564542 AP2A1O95782 977 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 MMP11P24347 488 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 ITGA3P26006 1051 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 PEBP1P30086 187 aaKnown RBP13.56□□□□□ -0.24
CDR2-204ENST00000564542 PLOD1Q02809 727 aaPredicted RBP13.56□□□□□ -0.24
CDR2-204ENST00000564542 SYTL3Q4VX76 610 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 PRAMEF13Q5VWM6 474 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 TMEM151BQ8IW70 566 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 COG1Q8WTW3 980 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 STYXQ8WUJ0 223 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 WDR54Q9H977 334 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 SLC6A20Q9NP91 592 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 SLC22A11Q9NSA0 550 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 EURLQ9NYK6 297 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 TFR2Q9UP52 801 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 PCDHA3Q9Y5H8 950 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 PRSS21Q9Y6M0 314 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 POLEQ07864 2286 aa13.56□□□□□ -0.24
CDR2-204ENST00000564542 A0A1B0GX78 115 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 SLC5A10A0PJK1 596 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 CCDC78A2IDD5 438 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 ISM1B1AKI9 464 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 BHMG1C9JSJ3 638 aaPredicted RBP13.55□□□□□ -0.24
CDR2-204ENST00000564542 E2F3O00716 465 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 ITGAXP20702 1163 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 ARSFP54793 590 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
CDR2-204ENST00000564542 POU6F1Q14863 301 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 BRD3Q15059 726 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 HIF1AQ16665 826 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 ARHGEF18Q6ZSZ5 1173 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 SLC34A3Q8N130 599 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 DENND1AQ8TEH3 1009 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 CDC23Q9UJX2 597 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 PLAGL1Q9UM63 463 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 CSMD1Q96PZ7 3565 aa13.55□□□□□ -0.24
CDR2-204ENST00000564542 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 ANKRD12Q6UB98 2062 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 MROH6A6NGR9 719 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 SOCS6O14544 535 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 TJP3O95049 919 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 ONECUT2O95948 504 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 ALBP02768 609 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 OR56A5P0C7T3 313 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 TPH1P17752 444 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 MAGP20916 626 aa13.54□□□□□ -0.24
CDR2-204ENST00000564542 ALAS2P22557 587 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms