RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SQLEQ14534 574 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 PCLAFQ15004 111 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 XKR3Q5GH77 459 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 SPDYCQ5MJ68 293 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 TMEM211Q6ICI0 200 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 FAAP20Q6NZ36 180 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 ZNF613Q6PF04 617 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 RTN4RL2Q86UN3 420 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 TMEM173Q86WV6 379 aaPredicted RBP4.15□□□□□ -1.75
UBR1-205ENST00000564540 EID3Q8N140 333 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 PYGO2Q9BRQ0 406 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 UBXN6Q9BZV1 441 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 EPHA6Q9UF33 1036 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 LRWD1Q9UFC0 647 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 WBP11Q9Y2W2 641 aaKnown RBP4.15□□□□□ -1.75
UBR1-205ENST00000564540 GPR75-ASB3A0A0A6YYF3 556 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 hCG_1807616A0A1W2PRN6 198 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 ANKRD61A6NGH8 418 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 E9PQ18 207 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 ENTPD3O75355 529 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 IGHV4-31P0DP07 118 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 CDH13P55290 713 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 CHAF1BQ13112 559 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 SGSM1Q2NKQ1 1148 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 CTU2Q2VPK5 515 aaKnown RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 SLC25A53Q5H9E4 307 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 RNASEH2BQ5TBB1 312 aaKnown RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 PTAR1Q7Z6K3 402 aaPredicted RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 RPAP2Q8IXW5 612 aaPredicted RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 CDK20Q8IZL9 346 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 KIRREL3Q8IZU9 778 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 LSMEM2Q8N112 164 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 OR5AP2Q8NGF4 316 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 PHLDA1Q8WV24 401 aaPredicted RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 LPGAT1Q92604 370 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 RBM4BQ9BQ04 359 aaKnown RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 POLR3GLQ9BT43 218 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 URM1Q9BTM9 101 aaKnown RBP4.14□□□□□ -1.75
UBR1-205ENST00000564540 FUCA2Q9BTY2 467 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 FGFBP2Q9BYJ0 223 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 SERINC1Q9NRX5 453 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 FGF21Q9NSA1 209 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 TBC1D22BQ9NU19 505 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 WDR37Q9Y2I8 494 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 SMAD5-AS1Q9Y6J3 95 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 PCDH11YQ9BZA8 1340 aa4.14□□□□□ -1.75
UBR1-205ENST00000564540 TMEM221A6NGB7 291 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 TSPAN1O60635 241 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 DFFBO76075 338 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 TOMM70O94826 608 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 HSPA8P11142 646 aaKnown RBP4.13□□□□□ -1.75
UBR1-205ENST00000564540 PTPN3P26045 913 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 DSCR10P59022 87 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 ZNF415Q09FC8 603 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 ENPP2Q13822 863 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 WTAPQ15007 396 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 MEA1Q16626 185 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 UGP2Q16851 508 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 ELFN2Q5R3F8 820 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 ITPRIPL1Q6GPH6 555 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 GUF1Q8N442 669 aaKnown RBP4.13□□□□□ -1.75
UBR1-205ENST00000564540 MARVELD2Q8N4S9 558 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 BMPERQ8N8U9 685 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 AZIN2Q96A70 460 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 SLC22A18Q96BI1 424 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 NSUN4Q96CB9 384 aaKnown RBP4.13□□□□□ -1.75
UBR1-205ENST00000564540 CALML4Q96GE6 196 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 TRIM51Q9BSJ1 452 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 ANGPTL3Q9Y5C1 460 aa4.13□□□□□ -1.75
UBR1-205ENST00000564540 MEIS2O14770 477 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 TSPAN9O75954 239 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 SMIM18P0DKX4 95 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 ZNF10P21506 573 aaPredicted RBP4.12□□□□□ -1.75
UBR1-205ENST00000564540 SLC9A3P48764 834 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 STAT2P52630 851 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 NAP1L1P55209 391 aaKnown RBP4.12□□□□□ -1.75
UBR1-205ENST00000564540 DRP2Q13474 957 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 E2F5Q15329 346 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 METTL7BQ6UX53 244 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 TMPRSS11BQ86T26 416 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 HOGA1Q86XE5 327 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 ZNF595Q8IYB9 648 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 TAGAPQ8N103 731 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 MCUQ8NE86 351 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 CCDC107Q8WV48 283 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 AGAP3Q96P47 875 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 MS4A10Q96PG2 267 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 RAD9AQ99638 391 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 PKP2Q99959 881 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 OR2B2Q9GZK3 357 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 Q9N2K0 584 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 SLC35C2Q9NQQ7 365 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 P4HTMQ9NXG6 502 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 ERAP1Q9NZ08 941 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 PCDHGB4Q9UN71 923 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 MYH15Q9Y2K3 1946 aa4.12□□□□□ -1.75
UBR1-205ENST00000564540 PCNX3Q9H6A9 2034 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 A8MV72 311 aaPredicted RBP4.11□□□□□ -1.75
UBR1-205ENST00000564540 WDHD1O75717 1129 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms