RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 A0A0J9YY10 115 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 KRT87PA6NCN2 255 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 HCRTR1O43613 425 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 NIPSNAP2O75323 286 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 TYSND1Q2T9J0 566 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 UNC5DQ6UXZ4 953 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 OTOAQ7RTW8 1153 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 SDCCAG8Q86SQ7 713 aaPredicted RBP24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 LINC01555Q8NAE3 123 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 ACTRT1Q8TDG2 376 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 SKA2Q8WVK7 121 aaPredicted RBP24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 APOBEC4Q8WW27 367 aaKnown RBP24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 BIRC8Q96P09 236 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 SERPINB12Q96P63 405 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 ACTR5Q9H9F9 607 aaPredicted RBP24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 NFS1Q9Y697 457 aa24.42■■□□□ 1.5
AC009041.3-201ENST00000564390 USP27XA6NNY8 438 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 KDM1AO60341 852 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 RPN2P04844 631 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 MSL3P1P0C860 447 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 BDKRB1P46663 353 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 RAB28P51157 221 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 ITGA1P56199 1179 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 GRB7Q14451 532 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 KYNUQ16719 465 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 PLEKHS1Q5SXH7 462 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 DSELQ8IZU8 1212 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 GSDMBQ8TAX9 411 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 MENTQ9BUN1 341 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 SYTL2Q9HCH5 934 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 POLHQ9Y253 713 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 KLHL20Q9Y2M5 609 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 CRYL1Q9Y2S2 319 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 KCNMB2Q9Y691 235 aa24.41■■□□□ 1.5
AC009041.3-201ENST00000564390 GOLGA6L10A0A0M3HER8 536 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 J3QKU1 62 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 MEN1O00255 615 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 PAMP19021 973 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 PTPN4P29074 926 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 RORAP35398 523 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 DHX34Q14147 1143 aaKnown RBP24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 KIR2DS3Q14952 304 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 PTCHD3Q3KNS1 767 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 RNF187Q5TA31 235 aaPredicted RBP24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 CNSTQ6PJW8 725 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 AGGF1Q8N302 714 aaeCLIP24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 MCUQ8NE86 351 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 N4BP2L2Q92802 583 aaPredicted RBP24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 TCTN2Q96GX1 697 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 XAB2Q9HCS7 855 aaKnown RBP24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 PCMTD2Q9NV79 361 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 SERTAD3Q9UJW9 196 aa24.4■■□□□ 1.5
AC009041.3-201ENST00000564390 BSNQ9UPA5 3926 aa24.39■■□□□ 1.5
AC009041.3-201ENST00000564390 E7EQ34 232 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 SNRNP200O75643 2136 aaKnown RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 KLK3P07288 261 aaPredicted RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 CTSBP07858 339 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 MLNP12872 115 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 OGNP20774 298 aaKnown RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 FNTAP49354 379 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 RPS15P62841 145 aaKnown RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 IL10RAQ13651 578 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 SLC5A12Q1EHB4 618 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 CCSMST1Q4G0I0 132 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 ANKRD20A4Q4UJ75 823 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 FAM69BQ5VUD6 431 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 ZNF470Q6ECI4 717 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 NEPROQ6NW34 567 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 ZNF517Q6ZMY9 492 aaPredicted RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 CENPUQ71F23 418 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 PTRH1Q86Y79 214 aaKnown RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 SYTL1Q8IYJ3 562 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 GRK7Q8WTQ7 553 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 LRFN5Q96NI6 719 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 GPR87Q9BY21 358 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 TRIM4Q9C037 500 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 SLC7A5P2Q9GIP4 190 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 ZNF71Q9NQZ8 489 aaPredicted RBP24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 TUBD1Q9UJT1 453 aa24.39■■□□□ 1.49
AC009041.3-201ENST00000564390 FAM237BA0A1B0GVD1 139 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 SDR42E2A6NKP2 422 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 ZNF749O43361 778 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 ZIC2O95409 532 aaPredicted RBP24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 ATXN8OSP0DMR3 200 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 MAGP20916 626 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 GABRA4P48169 554 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 CILP2Q8IUL8 1156 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 SPNS2Q8IVW8 549 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 ENDOVQ8N8Q3 282 aaKnown RBP24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 NAT8LQ8N9F0 302 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 C9orf43Q8TAL5 461 aaPredicted RBP24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 DDX47Q9H0S4 455 aaKnown RBP24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 GALPQ9UBC7 116 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 FARSAQ9Y285 508 aaKnown RBP24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 MAN2B2Q9Y2E5 1009 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 MAD1L1Q9Y6D9 718 aa24.38■■□□□ 1.49
AC009041.3-201ENST00000564390 SPTBP11277 2137 aa24.37■■□□□ 1.49
AC009041.3-201ENST00000564390 CES2O00748 559 aa24.37■■□□□ 1.49
AC009041.3-201ENST00000564390 RASGRF2O14827 1237 aa24.37■■□□□ 1.49
AC009041.3-201ENST00000564390 KPNA5O15131 536 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms