RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 NEMP2A6NFY4 417 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ZSCAN5BA6NJL1 495 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 EEF2KO00418 725 aaKnown RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 PER2O15055 1255 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 IRAK2O43187 625 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 USP12O75317 370 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 PRKD3O94806 890 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ETV6P41212 452 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SEPHS1P49903 392 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CLCN4P51793 760 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 OR2B6P58173 313 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 NFKB2Q00653 900 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 EMX2Q04743 252 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CHRNB3Q05901 458 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CDH17Q12864 832 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 TRAF3Q13114 568 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 KCNAB2Q13303 367 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 OLIG2Q13516 323 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 RCAN2Q14206 197 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 GALNT3Q14435 633 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CLCA4Q14CN2 919 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 YIF1BQ5BJH7 314 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 COLEC12Q5KU26 742 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 NEK5Q6P3R8 708 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 IDO2Q6ZQW0 420 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CCDC149Q6ZUS6 474 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 VN1R5Q7Z5H4 357 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MIB1Q86YT6 1006 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MFSD6LQ8IWD5 586 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ELMOD2Q8IZ81 293 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SLC38A6Q8IZM9 456 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.84□□□□□ -0.67
TCF4-222ENST00000564228 BEND7Q8N7W2 519 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 CCNYQ8ND76 341 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 JPH3Q8WXH2 748 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 PSMG2Q969U7 264 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 PGAP3Q96FM1 320 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 RIPOR3Q96MK2 946 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 FKBP14Q9NWM8 211 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CCDC59Q9P031 241 aaKnown RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 LEF1Q9UJU2 399 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 FZD10Q9ULW2 581 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 NCAM2O15394 837 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 TLR5O60602 858 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 LRIG2O94898 1065 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MT-ND1P03886 318 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 LBPP18428 481 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CHRM3P20309 590 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ALDH4A1P30038 563 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 PIGAP37287 484 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MTHFRP42898 656 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 TAS2R39P59534 338 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SLC35A2P78381 396 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CDK5R2Q13319 367 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ZNF460Q14592 562 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SNAP47Q5SQN1 464 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SULT1C3Q6IMI6 304 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 NAPEPLDQ6IQ20 393 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 SPATA19Q7Z5L4 167 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 KLHDC8BQ8IXV7 354 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 TDHQ8IZJ6 230 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 FAM83FQ8NEG4 500 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 ST6GAL2Q96JF0 529 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 C3orf30Q96M34 536 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MLPHQ9BV36 600 aaPredicted RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 GON7Q9BXV9 100 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 UGT2B28Q9BY64 529 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MKRN2Q9H000 416 aaKnown RBP10.84□□□□□ -0.67
TCF4-222ENST00000564228 TKTL2Q9H0I9 626 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 ADPRHL2Q9NX46 363 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 FBXL12Q9NXK8 326 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 TRPM5Q9NZQ8 1165 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 RAPGEFL1Q9UHV5 662 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MKLN1Q9UL63 735 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MYLKQ15746 1914 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 MIA3Q5JRA6 1907 aa10.84□□□□□ -0.67
TCF4-222ENST00000564228 DOCK4Q8N1I0 1966 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 SHROOM3Q8TF72 1996 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 PNMA8CA0A1B0GUJ8 204 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 EFCAB9A8MZ26 197 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 PTGES3LE9PB15 166 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 LOC110117498-PIK3R3F6TDL0 507 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 UBFD1O14562 309 aaKnown RBP10.83□□□□□ -0.68
TCF4-222ENST00000564228 POLR1CO15160 346 aaPredicted RBP10.83□□□□□ -0.68
TCF4-222ENST00000564228 CCL16O15467 120 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 CAPN5O15484 640 aaPredicted RBP10.83□□□□□ -0.68
TCF4-222ENST00000564228 SNX2O60749 519 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 MED26O95402 600 aa10.83□□□□□ -0.68
TCF4-222ENST00000564228 ANGPTL1O95841 491 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms