RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SIDT2Q8NBJ9 832 aaKnown RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 MCOLN3Q8TDD5 553 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 AHCYL2Q96HN2 611 aaKnown RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 HIST1H2AHQ96KK5 128 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 DEPDC7Q96QD5 511 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 FERD3LQ96RJ6 166 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 HIST1H2AJQ99878 128 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 H2AFJQ9BTM1 129 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 TMEM109Q9BVC6 243 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 TFB2MQ9H5Q4 396 aaKnown RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 LNPEPQ9UIQ6 1025 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 PSMD13Q9UNM6 376 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 NOVA2Q9UNW9 492 aaKnown RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 MED16Q9Y2X0 877 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 ACOT9Q9Y305 439 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 RASGRF2O14827 1237 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 DUX1O43812 170 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 SAT1P21673 171 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 SLC19A1P41440 591 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 CDKN2DP55273 166 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 AP1S2P56377 157 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 TAS2R39P59534 338 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 SQSTM1Q13501 440 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 ARHGAP19Q14CB8 494 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 PLCL1Q15111 1095 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 FAM83EQ2M2I3 478 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 ARHGAP40Q5TG30 622 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 MROH9Q5TGP6 573 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 PAQR3Q6TCH7 311 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 TIFABQ6ZNK6 161 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 EFL1Q7Z2Z2 1120 aaKnown RBP18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 CARFQ8N187 725 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 IFI44Q8TCB0 444 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 LKAAEAR1Q8TD35 194 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 DCAKDQ8WVC6 231 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 KCNE4Q8WWG9 221 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 ISL2Q96A47 359 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 INSM2Q96T92 566 aaPredicted RBP18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 DPH1Q9BZG8 443 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 DERL2Q9GZP9 239 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 STMN4Q9H169 189 aaPredicted RBP18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 POLR1BQ9H9Y6 1135 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 NMRAL1Q9HBL8 299 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 KCNK4Q9NYG8 393 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 ZNF624Q9P2J8 865 aaPredicted RBP18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 SLC17A6Q9P2U8 582 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 WDR37Q9Y2I8 494 aa18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 MTO1Q9Y2Z2 717 aaKnown RBP18.38■□□□□ 0.53
SYNGR3-203ENST00000563869 CPED1A4D0V7 1026 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 OR52A4PA6NMU1 304 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 PSIP1O75475 530 aaKnown RBP18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 FKBP9O95302 570 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 PDHA2P29803 388 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 PRKAA1Q13131 559 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 NAA25Q14CX7 972 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 EFTUD2Q15029 972 aaKnown RBP eCLIP18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 TSNAXIP1Q2TAA8 658 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 ACSBG2Q5FVE4 666 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 ARMC6Q6NXE6 501 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 CPNE9Q8IYJ1 553 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 SNRNP27Q8WVK2 155 aaKnown RBP18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 ATL1Q8WXF7 558 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 SLC22A18Q96BI1 424 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 LINGO1Q96FE5 620 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 RUFY1Q96T51 708 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 RAB33BQ9H082 229 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 EPB41L4BQ9H329 900 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 OR6C2Q9NZP2 312 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 SPATA7Q9P0W8 599 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 ENTPD2Q9Y5L3 495 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 PCM1Q15154 2024 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 UNC13CQ8NB66 2214 aa18.37■□□□□ 0.53
SYNGR3-203ENST00000563869 GOLGA6L10A6NI86 522 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 B8ZZF3 427 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 GFYI3L273 518 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 CSO75390 466 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 MAZP56270 477 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 RP1P56715 2156 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 CDKL4Q5MAI5 379 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 LRIG3Q6UXM1 1119 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 OOSP2Q86WS3 158 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 PLXDC1Q8IUK5 500 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 UHMK1Q8TAS1 419 aaKnown RBP18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 LCN9Q8WX39 176 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 ASB11Q8WXH4 323 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 TTC9Q92623 222 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 CCDC74AQ96AQ1 378 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 OLFM1Q99784 485 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 CCDC3Q9BQI4 270 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 SEMA4CQ9C0C4 833 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 PARVBQ9HBI1 364 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 ASCL3Q9NQ33 180 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 SENP1Q9P0U3 644 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 TMCO1Q9UM00 188 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 RNF215Q9Y6U7 377 aa18.36■□□□□ 0.53
SYNGR3-203ENST00000563869 MYO18BQ8IUG5 2567 aa18.35■□□□□ 0.53
SYNGR3-203ENST00000563869 SYCE1LA8MT33 242 aa18.35■□□□□ 0.53
SYNGR3-203ENST00000563869 KLK10O43240 276 aa18.35■□□□□ 0.53
SYNGR3-203ENST00000563869 EML2O95834 649 aa18.35■□□□□ 0.53
SYNGR3-203ENST00000563869 LTA4HP09960 611 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms