RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MED8Q96G25 268 aa21.36■■□□□ 1.01
LINC01960-201ENST00000563759 ABCF3Q9NUQ8 709 aa21.36■■□□□ 1.01
LINC01960-201ENST00000563759 HEY2Q9UBP5 337 aa21.36■■□□□ 1.01
LINC01960-201ENST00000563759 WDR37Q9Y2I8 494 aa21.36■■□□□ 1.01
LINC01960-201ENST00000563759 SPTY2D1-AS1A0A0U1RR47 76 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 PRR19A6NJB7 356 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 JUNP05412 331 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 IMPA1P29218 277 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 SERPINB3P29508 390 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 PRDX3P30048 256 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 CTBSQ01459 385 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 SYTL1Q8IYJ3 562 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 OR9A1PQ8NGU1 263 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 RAD51AP1Q96B01 352 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 CDK15Q96Q40 435 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 LRRC37BQ96QE4 947 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 KCNA7Q96RP8 456 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 TMEM168Q9H0V1 697 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 TRIT1Q9H3H1 467 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 GPR27Q9NS67 375 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 IMP3Q9NV31 184 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 APOBEC2Q9Y235 224 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 TDRKHQ9Y2W6 561 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 SDK1Q7Z5N4 2213 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 OR7A17O14581 309 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 ITPKAP23677 461 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 MAOBP27338 520 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 FOXA1P55317 472 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 ZXDCQ2QGD7 858 aaPredicted RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 SLC9B1Q4ZJI4 515 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 KANK2Q63ZY3 851 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 CAPRIN2Q6IMN6 1127 aaKnown RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 C6orf89Q6UWU4 347 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 TMEFF1Q8IYR6 380 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 PRMT8Q9NR22 394 aaPredicted RBP21.35■■□□□ 1.01
LINC01960-201ENST00000563759 SLC22A14Q9Y267 594 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 ST14Q9Y5Y6 855 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 DGKBQ9Y6T7 804 aa21.35■■□□□ 1.01
LINC01960-201ENST00000563759 CCDC163A0A0D9SF12 145 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 LAMTOR5O43504 91 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 OR4F21O95013 312 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 TNFP01375 233 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 FGF4P08620 206 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 AK4P27144 223 aaPredicted RBP21.34■■□□□ 1.01
LINC01960-201ENST00000563759 CD38P28907 300 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 HOXA6P31267 233 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 ACTR1BP42025 376 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 HALP42357 657 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 ACTR1AP61163 376 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 UAP1L1Q3KQV9 507 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 DUS1LQ6P1R4 473 aaKnown RBP21.34■■□□□ 1.01
LINC01960-201ENST00000563759 SLC30A9Q6PML9 568 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 ALYREFQ86V81 257 aaKnown RBP21.34■■□□□ 1.01
LINC01960-201ENST00000563759 PARGQ86W56 976 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 MFSD2AQ8NA29 543 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 PPFIBP2Q8ND30 876 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 PRDM8Q9NQV8 689 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 DNAJC11Q9NVH1 559 aa21.34■■□□□ 1.01
LINC01960-201ENST00000563759 TRNAU1APQ9NX07 287 aaKnown RBP21.34■■□□□ 1.01
LINC01960-201ENST00000563759 FNTBP49356 437 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ERVPABLB-1P60509 514 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 RACK1P63244 317 aaKnown RBP21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ILF3Q12906 894 aaKnown RBP eCLIP21.33■■□□□ 1.01
LINC01960-201ENST00000563759 TRAF3Q13114 568 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 PRKG2Q13237 762 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 NAE1Q13564 534 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 FZD2Q14332 565 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 FAM219BQ5XKK7 198 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 LETMD1Q6P1Q0 360 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 LAYNQ6UX15 382 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ACAD11Q709F0 780 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 MTDHQ86UE4 582 aaKnown RBP21.33■■□□□ 1.01
LINC01960-201ENST00000563759 CDYL2Q8N8U2 506 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 OR4F6Q8NGB9 312 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ZNF480Q8WV37 535 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ERP27Q96DN0 273 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 INSM2Q96T92 566 aaPredicted RBP21.33■■□□□ 1.01
LINC01960-201ENST00000563759 TCF7L2Q9NQB0 619 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 ZNF225Q9UK10 706 aa21.33■■□□□ 1.01
LINC01960-201ENST00000563759 GOLGA8QA0A0J9YX86 632 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 GOLGA8OA6NCC3 632 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 TMEM221A6NGB7 291 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 CCT8L1PA6NM43 557 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 GOLGA8NF8WBI6 632 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 M0R296 226 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 CHEK2O96017 543 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 UROSP10746 265 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 EPHA3P29320 983 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 BTKQ06187 659 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 TSTA3Q13630 321 aaPredicted RBP21.32■■□□□ 1
LINC01960-201ENST00000563759 KRT33BQ14525 404 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 ARMCX6Q7L4S7 300 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 MILR1Q7Z6M3 343 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 MYLK4Q86YV6 388 aaPredicted RBP21.32■■□□□ 1
LINC01960-201ENST00000563759 DCP2Q8IU60 420 aaKnown RBP21.32■■□□□ 1
LINC01960-201ENST00000563759 TBC1D21Q8IYX1 336 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 RGL4Q8IZJ4 473 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 FITM2Q8N6M3 262 aa21.32■■□□□ 1
LINC01960-201ENST00000563759 CCL4L1Q8NHW4 92 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms