RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 CAMK1DQ8IU85 385 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 SLC41A1Q8IVJ1 513 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 UBALD2Q8IYN6 164 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 IQCKQ8N0W5 287 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 CLRN3Q8NCR9 226 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 OR2A12Q8NGT7 310 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 GSDMBQ8TAX9 411 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 BLOC1S5Q8TDH9 187 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 STYXQ8WUJ0 223 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 SORCS1Q8WY21 1168 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 TFAP2CQ92754 450 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 NELL1Q92832 810 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 PEX13Q92968 403 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 ATG2BQ96BY7 2078 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 SCRN2Q96FV2 425 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 KLHL32Q96NJ5 620 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 ZIM3Q96PE6 472 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 KIFC1Q9BW19 673 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 FUT8Q9BYC5 575 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 TXLNGYQ9BZA5 131 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 GPR63Q9BZJ6 419 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 STMN4Q9H169 189 aaPredicted RBP4.59□□□□□ -1.67
CDR2-203ENST00000563573 PPCSQ9HAB8 311 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 MRM3Q9HC36 420 aaKnown RBP4.59□□□□□ -1.67
CDR2-203ENST00000563573 FBRSL1Q9HCM7 1045 aaKnown RBP4.59□□□□□ -1.67
CDR2-203ENST00000563573 CHRAC1Q9NRG0 131 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 PIH1D1Q9NWS0 290 aaKnown RBP4.59□□□□□ -1.67
CDR2-203ENST00000563573 SYBUQ9NX95 663 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 NSMCE4AQ9NXX6 385 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 NINJ2Q9NZG7 142 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 BCCIPQ9P287 314 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDR2-203ENST00000563573 TXNDC16Q9P2K2 825 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 WNT16Q9UBV4 365 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 DUSP12Q9UNI6 340 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 NCKAP1Q9Y2A7 1128 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 PKP3Q9Y446 797 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.59□□□□□ -1.67
CDR2-203ENST00000563573 STON1Q9Y6Q2 735 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 RPS6KL1Q9Y6S9 549 aa4.59□□□□□ -1.67
CDR2-203ENST00000563573 BRWD1Q9NSI6 2320 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TCF20Q9UGU0 1960 aaKnown RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 MYLKQ15746 1914 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 A0A0J9YYE9 177 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 EXOC1LA0A1B0GW35 172 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 C16orf96A6NNT2 1141 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 GOLGA8KD6RF30 607 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 POC1B-GALNT4F8VUJ3 575 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 KPNA3O00505 521 aaPredicted RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 TRAFD1O14545 582 aaPredicted RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 MAP2K7O14733 419 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 RASGRF2O14827 1237 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 BANF1O75531 89 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 GJB3O75712 270 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 KLF8O95600 359 aaPredicted RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 EGFP01133 1207 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TRBC1P01850 177 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 DNTTP04053 509 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 INHBAP08476 426 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 PDHA1P08559 390 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 NUDT17P0C025 328 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 ATXN1LP0C7T5 689 aaKnown RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 HLA-EP13747 358 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 CTPS1P17812 591 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 LPOP22079 712 aaPredicted RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 CTSSP25774 331 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 CNTFP26441 200 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 SSTR1P30872 391 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 GKP32189 559 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 HNF1BP35680 557 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 WASP42768 502 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 SERPINB9P50453 376 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 GPX6P59796 221 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 FAM193AP78312 1265 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 PRAMEP78395 509 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 CRADDP78560 199 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 ELP6Q0PNE2 266 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TRAF2Q12933 501 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 MTM1Q13496 603 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 NAB1Q13506 487 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 OLIG2Q13516 323 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 FRG1Q14331 258 aaKnown RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 MLF2Q15773 248 aaPredicted RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 UGP2Q16851 508 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 FASTKD1Q53R41 847 aaKnown RBP4.58□□□□□ -1.68
CDR2-203ENST00000563573 CEP85LQ5SZL2 805 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 C9orf64Q5T6V5 341 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TSTD2Q5T7W7 516 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 GRTP1Q5TC63 336 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 EMC10Q5UCC4 262 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 ZDHHC20Q5W0Z9 365 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 ZNF449Q6P9G9 518 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TPRG1Q6ZUI0 275 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TAOK1Q7L7X3 1001 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 TMEM135Q86UB9 458 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 LRRC6Q86X45 466 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 LYSMD2Q8IV50 215 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 CTAGE3PQ8IX95 158 aa4.58□□□□□ -1.68
CDR2-203ENST00000563573 LMNTD2Q8IXW0 634 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms