RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MS4A2Q01362 244 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 COX10Q12887 443 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 TMCO3Q6UWJ1 677 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 TMPRSS11FQ6ZWK6 438 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 BTN2A1Q7KYR7 527 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 LDB1Q86U70 411 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 ERC1Q8IUD2 1116 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 EID3Q8N140 333 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 TTC39CQ8N584 583 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 PAPD5Q8NDF8 572 aaKnown RBP2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 PRSS33Q8NF86 280 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARHGAP45Q92619 1136 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 WWTR1Q9GZV5 400 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 KCNK15Q9H427 330 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 EIF2B3Q9NR50 452 aaKnown RBP2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 SPHK2Q9NRA0 654 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 P4HTMQ9NXG6 502 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 THEGQ9P2T0 379 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 DAPK2Q9UIK4 370 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 GRID1Q9ULK0 1009 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 PPP2R2CQ9Y2T4 447 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF318Q5VUA4 2279 aa2.76□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCDC189A1A4V9 331 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 PAPSS1O43252 624 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 MED24O75448 989 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 HUNKP57058 714 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 DCAF7P61962 342 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 ELAVL2Q12926 359 aaKnown RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 NFATC2Q13469 925 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SPDYCQ5MJ68 293 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 GORABQ5T7V8 394 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 C20orf194Q5TEA3 1177 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 RTN4RL2Q86UN3 420 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 CDK20Q8IZL9 346 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 FBXL16Q8N461 479 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 NPEPL1Q8NDH3 523 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR11H4Q8NGC9 324 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR10G8Q8NGN5 311 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR52N5Q8NH56 324 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 GTF3AQ92664 365 aaKnown RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SAT2Q96F10 170 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF486Q96H40 463 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SOSTQ9BQB4 213 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SPATC1LQ9H0A9 340 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SHARPINQ9H0F6 387 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 CPVLQ9H3G5 476 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SMARCAD1Q9H4L7 1026 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 PRR34Q9NV39 138 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 B3GAT1Q9P2W7 334 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 SEC63Q9UGP8 760 aaKnown RBP2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 TP53TG3Q9ULZ0 132 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF148Q9UQR1 794 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 GRIP1Q9Y3R0 1128 aa2.75□□□□□ -1.97
HMGB1P33-201ENST00000563485 IGHV3OR16-10A0A075B7F0 116 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 PTGES3LE9PB15 166 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 F5H0A9 414 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 IDH3BO43837 385 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 PTP4A3O75365 173 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 C22orf31O95567 290 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 RBMS1P29558 406 aaKnown RBP2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 ACSL1P33121 698 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 SLC15A1P46059 708 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 RPL21P46778 160 aaKnown RBP2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARSEP51690 589 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 SIRPAP78324 504 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 CALCOCO2Q13137 446 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 NR1D2Q14995 579 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 FASTKD3Q14CZ7 662 aaKnown RBP2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 ELFN2Q5R3F8 820 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCDC30Q5VVM6 783 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 TMEM207Q6UWW9 146 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 FBXO39Q8N4B4 442 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 LINC00612Q8N6U2 182 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 Q8NBF4 154 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR2L2Q8NH16 312 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 NEK1Q96PY6 1258 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 URM1Q9BTM9 101 aaKnown RBP2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 RAB11FIP5Q9BXF6 653 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR2B2Q9GZK3 357 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 TBC1D17Q9HA65 648 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 MAN2C1Q9NTJ4 1040 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 CROCCQ5TZA2 2017 aa2.74□□□□□ -1.97
HMGB1P33-201ENST00000563485 A0A1W2PPR1 153 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 A0A1W2PR80 420 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 FEZF1A0PJY2 475 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 ANKUB1A6NFN9 424 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 EPB41L2O43491 1005 aaKnown RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 PRAMEF11O60813 436 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 AVILO75366 819 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 DDHD2O94830 711 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 HSPA8P11142 646 aaKnown RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 PRKACGP22612 351 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 PNLIPRP2P54317 469 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 MAZP56270 477 aaKnown RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 GCNT1Q02742 428 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 AIMP2Q13155 320 aaKnown RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 HERC3Q15034 1050 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 HSP90AB4PQ58FF6 505 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms