RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SORDQ00796 357 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 AKAP17AQ02040 695 aaKnown RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 ZNF672Q499Z4 452 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 SETMARQ53H47 684 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CELF3Q5SZQ8 465 aaKnown RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 HECTD3Q5T447 861 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 GPR139Q6DWJ6 353 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CXCL17Q6UXB2 119 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 SEPT14Q6ZU15 432 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 NIPA1Q7RTP0 329 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 TAGAPQ8N103 731 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 PPTC7Q8NI37 304 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 KCNG4Q8TDN1 519 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 WFIKKN2Q8TEU8 576 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 ATP6V1E2Q96A05 226 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 SPATA17Q96L03 361 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 NR1H4Q96RI1 486 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CSF3RQ99062 836 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 FAM110AQ9BQ89 295 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 HAUS8Q9BT25 410 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 NDST4Q9H3R1 872 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 C6orf50Q9HD87 102 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 VPS54Q9P1Q0 977 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CHORDC1Q9UHD1 332 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 TTC7AQ9ULT0 858 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 UBIAD1Q9Y5Z9 338 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 COL4A4P53420 1690 aaPredicted RBP4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CDH23Q9H251 3354 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 CHD9Q3L8U1 2897 aa4.79□□□□□ -1.64
LINC00254-201ENST00000563416 NFASCO94856 1347 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 TDRD15B5MCY1 1934 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 PDCD11Q14690 1871 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IGLV3-22A0A075B6J6 115 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 A0A1W2PQM1 296 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 GOLGA6L9A6NEM1 432 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 NPIPB15A6NHN6 443 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IFITM10A6NMD0 228 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 PTGES3LE9PB15 166 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 HAS3O00219 553 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 LDLRAD4O15165 306 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 EDIL3O43854 480 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 PGM3O95394 542 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 GGPS1O95749 300 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 AFPP02771 609 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 CLTBP09497 229 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 G6PDP11413 515 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 FDPSP14324 419 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 MAOAP21397 527 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 EIF2S3P41091 472 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 RPL7AP62424 266 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ZNF155Q12901 538 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 STK4Q13043 487 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 DCTN2Q13561 401 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 NAE1Q13564 534 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ITGA7Q13683 1181 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 HSDL1Q3SXM5 330 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 C6orf141Q5SZD1 244 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 GGNBP1Q5YKI7 109 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 PLEKHA7Q6IQ23 1121 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 GALNT17Q6IS24 598 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ANKRD54Q6NXT1 300 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 KCTD18Q6PI47 426 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 METTL7BQ6UX53 244 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IKBIPQ70UQ0 350 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 VSIG1Q86XK7 387 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 NAGSQ8N159 534 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 NECAB1Q8N987 351 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 SECTM1Q8WVN6 248 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 CDHR1Q96JP9 859 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 MTG1Q9BT17 334 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IFIH1Q9BYX4 1025 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ESRP2Q9H6T0 727 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ZWILCHQ9H900 591 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 UPF2Q9HAU5 1272 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 HINT3Q9NQE9 182 aaKnown RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ASAH2Q9NR71 780 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 KCNG2Q9UJ96 466 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 HAO1Q9UJM8 370 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 TBX21Q9UL17 535 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 ZNF215Q9UL58 517 aaPredicted RBP4.78□□□□□ -1.64
LINC00254-201ENST00000563416 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 NOTCH4Q99466 2003 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 CHD7Q9P2D1 2997 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 REV3LO60673 3130 aa4.78□□□□□ -1.64
LINC00254-201ENST00000563416 IGHV4OR15-8A0A075B7B6 117 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 HNRNPCL2B2RXH8 293 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 FAM86B1E9PN63 330 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 ATP9AO75110 1047 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 SEC14L2O76054 403 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 BEST1O76090 585 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 FAM86B2P0C5J1 330 aa4.77□□□□□ -1.65
LINC00254-201ENST00000563416 CDH2P19022 906 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms