RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 HOXD9P28356 352 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 AKR1D1P51857 326 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 DGKEP52429 567 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ERVK-8P63133 956 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNHIT3Q15649 155 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 CPTPQ5TA50 214 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 GAREM2Q75VX8 874 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CHST15Q7LFX5 561 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 DHDDSQ86SQ9 333 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 MFSD6LQ8IWD5 586 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF781Q8N8C0 355 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PJA1Q8NG27 643 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ARRDC2Q8TBH0 407 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 NACC2Q96BF6 587 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PLEKHA8Q96JA3 519 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ATG10Q9H0Y0 220 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CARS2Q9HA77 564 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 OSER1Q9NX31 292 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 STON1Q9Y6Q2 735 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 TTC24A2A3L6 582 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 GPR89AB7ZAQ6 455 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 GFRA2O00451 464 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 GRID2O43424 1007 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 WFS1O76024 890 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 OR4F21O95013 312 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 EBLN1P0CF75 366 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 GPR89BP0CG08 455 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZCCHC18P0CG32 403 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 HLA-EP13747 358 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PORP16435 677 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 ACTR1BP42025 376 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ACTR1AP61163 376 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 HTRA4P83105 476 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 ATP1A4Q13733 1029 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CST6Q15828 149 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF852Q6ZMS4 543 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CYP4V2Q6ZWL3 525 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 RALGPS2Q86X27 583 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 HID1Q8IV36 788 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 GPR135Q8IZ08 494 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PGAM4Q8N0Y7 254 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 EFCAB3Q8N7B9 438 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 AGAP11Q8TF27 550 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ADNPQ9H2P0 1102 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 DDX18Q9NVP1 670 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 HCFC1R1Q9NWW0 138 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CACNA2D2Q9NY47 1150 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SCN3BQ9NY72 215 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 POLR3HQ9Y535 204 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 RFXANKO14593 260 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 WBP4O75554 376 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 PGM3O95394 542 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CYP17A1P05093 508 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 TNNI3P19429 210 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 KCNA5P22460 613 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PLIN5Q00G26 463 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 TMEM115Q12893 351 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 LRP8Q14114 963 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF460Q14592 562 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SMU1Q2TAY7 513 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 USP39Q53GS9 565 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 NADSYN1Q6IA69 706 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 DPPA4Q7L190 304 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 RCN3Q96D15 328 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 APOLD1Q96LR9 279 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF317Q96PQ6 595 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 OR52E6Q96RD3 313 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 C9orf16Q9BUW7 83 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 C3orf14Q9HBI5 128 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 PSAT1Q9Y617 370 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ATP6AP2A0A1C7CYW4 349 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PRR5-ARHGAP8B1AHC4 643 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CACNG3O60359 315 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF217O75362 1048 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ATP6AP2O75787 350 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PRKCGP05129 697 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 HPGDP15428 266 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 TRIM23P36406 574 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ARHGAP8P85298 464 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 MTX3Q5HYI7 312 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ANKRD54Q6NXT1 300 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 PROSER1Q86XN7 944 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 CNTN4Q8IWV2 1026 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SPARTQ8N0X7 666 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 ZNF366Q8N895 744 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 USP7Q93009 1102 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 WDR55Q9H6Y2 383 aaPredicted RBP7.39□□□□□ -1.23
TCF4-216ENST00000562680 SUSD2Q9UGT4 822 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 SNX13Q9Y5W8 968 aa7.39□□□□□ -1.23
TCF4-216ENST00000562680 FAM47E-STBD1D6RA91 191 aa7.38□□□□□ -1.23
TCF4-216ENST00000562680 ZNF682O95780 498 aa7.38□□□□□ -1.23
TCF4-216ENST00000562680 IL6P05231 212 aa7.38□□□□□ -1.23
TCF4-216ENST00000562680 POU2F2P09086 479 aa7.38□□□□□ -1.23
TCF4-216ENST00000562680 ZNF23P17027 643 aa7.38□□□□□ -1.23
TCF4-216ENST00000562680 SMIM11AP58511 58 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms