RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 ETS1P14921 441 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 RPL22P35268 128 aaKnown RBP12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 PTGIRP43119 386 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 NPY2RP49146 381 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 CCL11P51671 97 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 RRADP55042 308 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 HSPA14Q0VDF9 509 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 SEMA3AQ14563 771 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 ZIC1Q15915 447 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 PTCHD3Q3KNS1 767 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 COLEC12Q5KU26 742 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 CPZQ66K79 652 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 ATCAYQ86WG3 371 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 LRRC6Q86X45 466 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 RAB43Q86YS6 212 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 DCUN1D3Q8IWE4 304 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 DNAJC22Q8N4W6 341 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 DENND1AQ8TEH3 1009 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 PANX3Q96QZ0 392 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 KLHL25Q9H0H3 589 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 TREX1Q9NSU2 369 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 CATSPERZQ9NTU4 200 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 PLCL2Q9UPR0 1127 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
AC009055.1-201ENST00000562656 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CD3EAPO15446 510 aaKnown RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 ZSCAN9O15535 394 aaPredicted RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 FKBP9O95302 570 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 S1PR4O95977 384 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 IGHEP01854 428 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CD9P21926 228 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 AOAHP28039 575 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 PKLRP30613 574 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CDK16Q00536 496 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 SSPNQ14714 243 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 TMED2Q15363 201 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 ARMC3Q5W041 872 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 NAPRTQ6XQN6 538 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 TRIM73Q86UV7 250 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 ZBTB2Q8N680 514 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 GLIS1Q8NBF1 620 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 GBP5Q96PP8 586 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 MENTQ9BUN1 341 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 RAB11FIP5Q9BXF6 653 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 ENAMQ9NRM1 1142 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 BFARQ9NZS9 450 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 GNPTGQ9UJJ9 305 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 ZNF451Q9Y4E5 1061 aa12.63□□□□□ -0.39
AC009055.1-201ENST00000562656 CCDC175P0C221 793 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 ZSCAN5DPP0CG00 497 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 PEBP1P30086 187 aaKnown RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 SESN2P58004 480 aaPredicted RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 CHAF1BQ13112 559 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 GRB7Q14451 532 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 PTRHD1Q6GMV3 140 aaKnown RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 TTC23LQ6PF05 361 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 VRK3Q8IV63 474 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 LINC01555Q8NAE3 123 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 TRIM58Q8NG06 486 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 NACC2Q96BF6 587 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 NDC1Q9BTX1 674 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 KIFC1Q9BW19 673 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 SPRTNQ9H040 489 aaPredicted RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 P2RY12Q9H244 342 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 INTS7Q9NVH2 962 aaKnown RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 GPN3Q9UHW5 284 aaPredicted RBP12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
AC009055.1-201ENST00000562656 FER1L5A0AVI2 2057 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 TTLL8A6PVC2 850 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 IQCF5A8MTL0 148 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 PFDN6O15212 129 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 HCRTR1O43613 425 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 KLHL41O60662 606 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 DPM1O60762 260 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 NDUFS3O75489 264 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 FGGP02679 453 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 CBSLP0DN79 551 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 TPSB2P20231 275 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 CBSP35520 551 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 ARSFP54793 590 aa12.61□□□□□ -0.39
AC009055.1-201ENST00000562656 CSE1LP55060 971 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms