RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TRIM16O95361 564 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 CD6P30203 668 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 GRK3P35626 688 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 THPOP40225 353 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PCYT1AP49585 367 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 KCNQ1P51787 676 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC35A2P78381 396 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SMN1Q16637 294 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 CPZQ66K79 652 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 ATG9BQ674R7 924 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SHQ1Q6PI26 577 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SBSNQ6UWP8 590 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 C10orf111Q8N326 155 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SVOPQ8N4V2 548 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PHF10Q8WUB8 498 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 RPL3LQ92901 407 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 ULK4Q96C45 1275 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF300Q96RE9 604 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 MAGEH1Q9H213 219 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 DUSP21Q9H596 190 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 ABCB10Q9NRK6 738 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 WWOXQ9NZC7 414 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 DHRS7Q9Y394 339 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 OXSR1O95747 527 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CD9P21926 228 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TGFBR1P36897 503 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 MASP1P48740 699 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 KCNJ8Q15842 424 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CARD16Q5EG05 197 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 GNASQ5JWF2 1037 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 SYT6Q5T7P8 510 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 APOL4Q9BPW4 351 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ADGRE3Q9BY15 652 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CLMPQ9H6B4 373 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 RMND5AQ9H871 391 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 RASSF1Q9NS23 344 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ANKMY1Q9P2S6 941 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ATP11BQ9Y2G3 1177 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ANKRD66B4E2M5 251 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CBX4O00257 560 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 PAX3P23760 479 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CLK3P49761 638 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CARTPTQ16568 116 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CATSPEREQ5SY80 951 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 LAIR1Q6GTX8 287 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 RGL4Q8IZJ4 473 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TMEM132CQ8N3T6 1108 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 HTRA1Q92743 480 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 YIPF2Q9BWQ6 316 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 DSN1Q9H410 356 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CCSER2Q9H7U1 834 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ELOVL2Q9NXB9 296 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 SCHIP1Q9P0W5 487 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 PRG3Q9Y2Y8 225 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TDRD15B5MCY1 1934 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TTC34A8MYJ7 566 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 PER2O15055 1255 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TAPBPO15533 448 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 DIRAS1O95057 198 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CD36P16671 472 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 JUNDP17535 347 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CD40LGP29965 261 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 S100A3P33764 101 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CLK1P49759 484 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 DAPP51397 102 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC13A2Q13183 592 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CEP68Q76N32 757 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ARMC8Q8IUR7 673 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 STK40Q8N2I9 435 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 STARD8Q92502 1023 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 MYOCQ99972 504 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 CIPCQ9C0C6 399 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 KIF17Q9P2E2 1029 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 VPS51Q9UID3 782 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
VPS9D1-202ENST00000561976 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 OR1G1P47890 313 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 PPP5CP53041 499 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 INPP5KQ9BT40 448 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 FAM126AQ9BYI3 521 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 ACOT13Q9NPJ3 140 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 EFCAB9A8MZ26 197 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 TLR5O60602 858 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms