RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 GBP4Q96PP9 640 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 SRPK1Q96SB4 655 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 COPS8Q99627 209 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 BARD1Q99728 777 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 CCM2Q9BSQ5 444 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 NDC1Q9BTX1 674 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 DHRS4Q9BTZ2 278 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 SMARCAL1Q9NZC9 954 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 COPG2Q9UBF2 871 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 ENTPD4Q9Y227 616 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 ASF1AQ9Y294 204 aa11.24□□□□□ -0.61
NSMCE1-202ENST00000561960 A0A0J9YY10 115 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 SYCE3A1L190 88 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 MATN2O00339 956 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 AKR1B10O60218 316 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 DIAPH2O60879 1101 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 MED26O95402 600 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 HBQ1P09105 142 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 RALBP11234 206 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 ITGALP20701 1170 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 AIMP2Q13155 320 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 AGAP7PQ5VUJ5 663 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 FAAH2Q6GMR7 532 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 SARM1Q6SZW1 724 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 FAM180AQ6UWF9 173 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 KIRREL2Q6UWL6 708 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 PIANPQ8IYJ0 282 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 CARFQ8N187 725 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 CFAP61Q8NHU2 1237 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 CCDC110Q8TBZ0 833 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 FAR1Q8WVX9 515 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 ZFPM2Q8WW38 1151 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 MOCOSQ96EN8 888 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 LINC00615Q96LM1 132 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 AGAP4Q96P64 663 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 DPH2Q9BQC3 489 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 GBA3Q9H227 469 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 ZNF160Q9HCG1 818 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 OLAHQ9NV23 265 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 SCN3AQ9NY46 2000 aa11.23□□□□□ -0.61
NSMCE1-202ENST00000561960 hCG_1818297A0A087WSY0 165 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 JRKO75564 520 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ACRV1P26436 265 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ADRA1AP35348 466 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 HADHAP40939 763 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ARHGAP25P42331 645 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 GEMP55040 296 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 PER3P56645 1201 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 PMP22Q01453 160 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 RBBP7Q16576 425 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 DBN1Q16643 649 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ASTE1Q2TB18 679 aaPredicted RBP11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 AADACL2Q6P093 401 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 DNAJC22Q8N4W6 341 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 SIRT6Q8N6T7 355 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 PPP4R1Q8TF05 950 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ELMO1Q92556 727 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 KRT35Q92764 455 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 TAAR6Q96RI8 345 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 AP1M1Q9BXS5 423 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 XPO4Q9C0E2 1151 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 MVB12BQ9H7P6 319 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 SYTL2Q9HCH5 934 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 DDX56Q9NY93 547 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 EURLQ9NYK6 297 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 PTGFRNQ9P2B2 879 aa11.22□□□□□ -0.61
NSMCE1-202ENST00000561960 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 ZNF487B1APH4 448 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 IPO13O94829 963 aaKnown RBP11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 EPOP01588 193 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 UQCRHP07919 91 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 MSL3P1P0C860 447 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 EDN3P14138 238 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 PSMB5P28074 263 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 NR2C2P49116 596 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 KRTAP10-9P60411 292 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 EEF1A2Q05639 463 aaKnown RBP11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 TFDP2Q14188 446 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 POU6F1Q14863 301 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 CDSNQ15517 529 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 NKG7Q16617 165 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 SYTL3Q4VX76 610 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 CCDC38Q502W7 563 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 CCDC181Q5TID7 509 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 IRAK1BP1Q5VVH5 260 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 SNX20Q7Z614 316 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 VRK3Q8IV63 474 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 PROKR1Q8TCW9 393 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 ULK4Q96C45 1275 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 SPSB2Q99619 263 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms