RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HAS2Q92819 552 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 NACC2Q96BF6 587 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 C18orf8Q96DM3 657 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 SCRN2Q96FV2 425 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CELF6Q96J87 481 aaKnown RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 VPS50Q96JG6 964 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 RHOVQ96L33 236 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 NSMCE3Q96MG7 304 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 GPR137Q96N19 417 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 AP1M1Q9BXS5 423 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 RAB6CQ9H0N0 254 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CATSPERBQ9H7T0 1116 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 SYTL2Q9HCH5 934 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 FAM207AQ9NSI2 230 aaPredicted RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 GPATCH2Q9NW75 528 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 PTGFRNQ9P2B2 879 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ATXN10Q9UBB4 475 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 SLC23A2Q9UGH3 650 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CNOT6Q9ULM6 557 aaKnown RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 MRPS2Q9Y399 296 aaKnown RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 FHOD1Q9Y613 1164 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ANK2Q01484 3957 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 TGP01266 2768 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ARHGAP42A6NI28 874 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 IDSB3KWA1 339 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 NPIPA5E9PKD4 350 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PRRG2O14669 202 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ADAM10O14672 748 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 KMOO15229 486 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PMM2O15305 246 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ZNHIT1O43257 154 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ARHGEF9O43307 516 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 SOCS5O75159 536 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 CRLF1O75462 422 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 USP1O94782 785 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 TOXO94900 526 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 SLC25A14O95258 325 aaPredicted RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 HTR3BO95264 441 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 RAC2P15153 192 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 TPP2P29144 1249 aaPredicted RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 CHRNB4P30926 498 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ME1P48163 572 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 LMAN1P49257 510 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PAPOLAP51003 745 aaKnown RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 KPNA2P52292 529 aaKnown RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 FKBP3Q00688 224 aaKnown RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 ALDH6A1Q02252 535 aaKnown RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 CACNG1Q06432 222 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 MPP2Q14168 576 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 SYCP1Q15431 976 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 RBBP7Q16576 425 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 C15orf59Q2T9L4 293 aaPredicted RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 TUBB8Q3ZCM7 444 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 NKAIN1Q4KMZ8 207 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 ARMC12Q5T9G4 340 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 SHEQ5VZ18 495 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 TRNP1Q6NT89 227 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PODNL1Q6PEZ8 512 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 KIRREL2Q6UWL6 708 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PAMR1Q6UXH9 720 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 WASH2PQ6VEQ5 465 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 NAPRTQ6XQN6 538 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 BNIPLQ7Z465 357 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 CDC20BQ86Y33 519 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 DOLPP1Q86YN1 238 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 NDUFAF2Q8N183 169 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 CARFQ8N187 725 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PYROXD2Q8N2H3 581 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 CIARTQ8N365 385 aaPredicted RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 CCDC185Q8N715 623 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 EMC1Q8N766 993 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 GPR150Q8NGU9 434 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 FBXO27Q8NI29 283 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PROKR1Q8TCW9 393 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 KIRREL1Q96J84 757 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 MCCC1Q96RQ3 725 aaPredicted RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 DMRTA2Q96SC8 542 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 TSG101Q99816 390 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 PDCL3Q9H2J4 239 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 SP110Q9HB58 689 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 RASSF1Q9NS23 344 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 TXLNGQ9NUQ3 528 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 FAM53CQ9NYF3 392 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 DHCR7Q9UBM7 475 aaKnown RBP5.1□□□□□ -1.59
HERC1-213ENST00000561359 TRPS1Q9UHF7 1281 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 NPIPA1Q9UND3 350 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 WDR37Q9Y2I8 494 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 HS3ST3B1Q9Y662 390 aa5.1□□□□□ -1.59
HERC1-213ENST00000561359 HRNRQ86YZ3 2850 aaPredicted RBP5.09□□□□□ -1.59
HERC1-213ENST00000561359 GSAPA4D1B5 854 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 FADS2P1A8MWK0 482 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 GPR89AB7ZAQ6 455 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 DFFAO00273 331 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 P4HA2O15460 535 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 VEGFDO43915 354 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 OR2B3O76000 313 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 ATE1O95260 518 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 PGLSO95336 258 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 PRAMEF1O95521 474 aa5.09□□□□□ -1.59
HERC1-213ENST00000561359 YEATS4O95619 227 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms