RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 MTO1Q9Y2Z2 717 aaKnown RBP10.4□□□□□ -0.74
TPM1-229ENST00000561242 MSRB2Q9Y3D2 182 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
TPM1-229ENST00000561242 FANCMQ8IYD8 2048 aa10.4□□□□□ -0.75
TPM1-229ENST00000561242 GON4LQ3T8J9 2241 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 NTN3O00634 580 aaPredicted RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 SMIM24O75264 130 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 TNFSF15O95150 251 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 GUCA1CO95843 209 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CHRM5P08912 532 aaPredicted RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 RBP1P09455 135 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 LTA4HP09960 611 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 FDXRP22570 491 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 HRH2P25021 359 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 ACADLP28330 430 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 OAS2P29728 719 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 CCKBRP32239 447 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 SLC26A3P40879 764 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 BDKRB1P46663 353 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 HNMTP50135 292 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 PNLIPRP1P54315 467 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CDKN2DP55273 166 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 HSD11B2P80365 405 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CSHL1Q14406 222 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 TSNAXIP1Q2TAA8 658 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 RBM20Q5T481 1227 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 BROXQ5VW32 411 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 ZNF549Q6P9A3 640 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 C2orf73Q8N5S3 287 aaPredicted RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 DCBLD1Q8N8Z6 715 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CCDC63Q8NA47 563 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 OR2L8Q8NGY9 312 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 LKAAEAR1Q8TD35 194 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CD200R1Q8TD46 325 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 ASB11Q8WXH4 323 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 LIN37Q96GY3 246 aaPredicted RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 TEFMQ96QE5 360 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 GPR22Q99680 433 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 HAUS8Q9BT25 410 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CAPS2Q9BXY5 557 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 RAB33BQ9H082 229 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 CAAP1Q9H8G2 361 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 MRPS30Q9NP92 439 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 CCDC177Q9NQR7 707 aaPredicted RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 WWOXQ9NZC7 414 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 ZNF180Q9UJW8 692 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 RARRES3Q9UL19 164 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 PLAGL1Q9UM63 463 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 RUVBL2Q9Y230 463 aaKnown RBP10.39□□□□□ -0.75
TPM1-229ENST00000561242 ST14Q9Y5Y6 855 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
TPM1-229ENST00000561242 A0A096LPK6 155 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 LY6G6EA0A0G2JKS1 128 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 IGHV5-10-1A0A0J9YXX1 117 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 A0A0J9YY10 115 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 A0A1W2PQM1 296 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 CCDC189A1A4V9 331 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 TRABD2BA6NFA1 517 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 CXorf49A8MYA2 514 aaPredicted RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 SUPT3HB4E1H0 165 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PSIP1O75475 530 aaKnown RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 SUPT3HO75486 399 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 MATN4O95460 622 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 GFAPP14136 432 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 LSSP48449 732 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 CCT5P48643 541 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 TAS2R39P59534 338 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 ABATP80404 500 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 HIST2H2ACQ16777 129 aaPredicted RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 HIST2H2AA3Q6FI13 130 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PIWIL4Q7Z3Z4 852 aaKnown RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 TAX1BP1Q86VP1 789 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 VRK3Q8IV63 474 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SFTPA2Q8IWL1 248 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 GSPT2Q8IYD1 628 aaKnown RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 ZNF655Q8N720 491 aaPredicted RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 RCBTB1Q8NDN9 531 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 OR8K5Q8NH50 307 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SLC44A1Q8WWI5 657 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 EXT2Q93063 718 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 RERGQ96A58 199 aaPredicted RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 TCTN2Q96GX1 697 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PDLIM5Q96HC4 596 aaKnown RBP10.38□□□□□ -0.75
TPM1-229ENST00000561242 TAAR9Q96RI9 348 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 MIPEPQ99797 713 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SLC12A9Q9BXP2 914 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SEMA6CQ9H3T2 930 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 TOR4AQ9NXH8 423 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SLC17A6Q9P2U8 582 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 TBK1Q9UHD2 729 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 TMCO1Q9UM00 188 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 SNX7Q9UNH6 387 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms