RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 BRMS1LQ5PSV4 323 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 EEF1AKMT1Q8WVE0 214 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 KCNS3Q9BQ31 491 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 ANGPTL3Q9Y5C1 460 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 STX16O14662 325 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 TFECO14948 347 aaPredicted RBP16.14■□□□□ 0.17
TPM1-228ENST00000560975 NIPSNAP2O75323 286 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 CNMDO75829 334 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 B3GALT4O96024 378 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 VIPP01282 170 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 HSMCR30P0CW71 290 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 UGT2B10P36537 528 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 ARHGDIAP52565 204 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 PRKCDQ05655 676 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 KEAP1Q14145 624 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 PTPRNQ16849 979 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 SPANXN2Q5MJ10 180 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 ANKRD46Q86W74 232 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
TPM1-228ENST00000560975 UBQLNLQ8IYU4 475 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 OR4F6Q8NGB9 312 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 CENPOQ9BU64 300 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 IRF2BPLQ9H1B7 796 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 POPDC3Q9HBV1 291 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 HS3ST4Q9Y661 456 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 NUP214P35658 2090 aaPredicted RBP16.14■□□□□ 0.17
TPM1-228ENST00000560975 SLC12A8A0AV02 714 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 PER2O15055 1255 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 HOXA9P31269 272 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 CYP2C18P33260 490 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 ADCYAP1R1P41586 468 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 GALK2Q01415 458 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 HMGCS1Q01581 520 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 NEK5Q6P3R8 708 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 PGBD5Q8N414 524 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 MYLPFQ96A32 169 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 SMARCD1Q96GM5 515 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 DPY30Q9C005 99 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 KRT84Q9NSB2 600 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 GIMAP4Q9NUV9 329 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 BTBD3Q9Y2F9 522 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 MAU2Q9Y6X3 613 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 LOC285556D6RIA3 1793 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 CTDSP2O14595 271 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 NDUFS3O75489 264 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 SERPINF2P08697 491 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 NUDT6P53370 316 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 RPP38P78345 283 aaKnown RBP16.13■□□□□ 0.17
TPM1-228ENST00000560975 CHRNEQ04844 493 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 KRR1Q13601 381 aaKnown RBP16.13■□□□□ 0.17
TPM1-228ENST00000560975 TBRG1Q3YBR2 411 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 RUNDC3AQ59EK9 446 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 MANEALQ5VSG8 457 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 KDM4DQ6B0I6 523 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 LYPD8Q6UX82 237 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 P3H2Q8IVL5 708 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 LINGO1Q96FE5 620 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 ST6GAL2Q96JF0 529 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 OR52E6Q96RD3 313 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 BEX2Q9BXY8 128 aa16.13■□□□□ 0.17
TPM1-228ENST00000560975 KRT87PA6NCN2 255 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 LOC110117498-PIK3R3F6TDL0 507 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 TLL1O43897 1013 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 GPR32O75388 356 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 PGRP06401 933 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 RETP07949 1114 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 KCNE1P15382 129 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 GNG2P59768 71 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 OR2T5Q6IEZ7 315 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 DEPDC4Q8N2C3 294 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CADM2Q8N3J6 435 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 OR2T29Q8NH02 315 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SUN5Q8TC36 379 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SMIM14Q96QK8 99 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 ZNF382Q96SR6 550 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 C1orf109Q9NX04 203 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 TAS2R9Q9NYW1 312 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 NDRG4Q9ULP0 352 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 TTC3P53804 2025 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 MEIS3P2A8K0S8 358 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 OR1I1O60431 355 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SLC15A1P46059 708 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 KRT6CP48668 564 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CRISP3P54108 245 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 VGLL4Q14135 290 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CEP78Q5JTW2 689 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 KIAA1614Q5VZ46 1190 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 GPR153Q6NV75 609 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 LIX1Q8N485 282 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CHAC2Q8WUX2 184 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 APH1BQ8WW43 257 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CDKN2AIPNLQ96HQ2 116 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CEP19Q96LK0 163 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 TNKS2Q9H2K2 1166 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 MAGIXQ9H6Y5 334 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms