RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 PAF1Q8N7H5 531 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 IPMKQ8NFU5 416 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RHOXF1Q8NHV9 184 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 HMGCLL1Q8TB92 370 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ATL1Q8WXF7 558 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 NDRG1Q92597 394 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 EDAQ92838 391 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 KIAA1191Q96A73 305 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF707Q96C28 371 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PPP3R2Q96LZ3 170 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF599Q96NL3 588 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SEPT5Q99719 369 aaPredicted RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SLC30A3Q99726 388 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 CCDC32Q9BV29 185 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 RAB6CQ9H0N0 254 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 GABARAPL1Q9H0R8 117 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 HEBP1Q9NRV9 189 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PIGVQ9NUD9 493 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 PIH1D1Q9NWS0 290 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 FAM118AQ9NWS6 357 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 TAS2R13Q9NYV9 303 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 SAMD4AQ9UPU9 718 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 EIF3LQ9Y262 564 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 BTRCQ9Y297 605 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 TLR6Q9Y2C9 796 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 ANGPTL3Q9Y5C1 460 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 DNAJC15Q9Y5T4 150 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 GPR45Q9Y5Y3 372 aa8.39□□□□□ -1.07
CCDC33-209ENST00000560565 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
CCDC33-209ENST00000560565 DNAH14Q0VDD8 3507 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ACACBO00763 2458 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 LOC100130705A0A1B0GUX0 176 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 A0A1W2PQH9 124 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TMEM233B4DJY2 109 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 F5H423 210 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 J3QRK9 145 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 SLC1A7O00341 560 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 SNPHO15079 494 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CCL16O15467 120 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 RGS10O43665 173 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 DFNA5O60443 496 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 UPK1BO75841 260 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PRKD3O94806 890 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CST1P01037 141 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 EPOP01588 193 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 LRG1P02750 347 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 IL6P05231 212 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TFPTP0C1Z6 253 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CD1DP15813 335 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TPH1P17752 444 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PFKLP17858 780 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CAPN3P20807 821 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 FDXRP22570 491 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 HOXA9P31269 272 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CLK1P49759 484 aaKnown RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 EPHB3P54753 998 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ZXDAP98168 799 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CLCQ05315 142 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PRKCDQ05655 676 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CTBP1Q13363 440 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PLCL1Q15111 1095 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 KCNJ8Q15842 424 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ST3GAL2Q16842 350 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 UNC50Q53HI1 259 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PNCKQ6P2M8 343 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF549Q6P9A3 640 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TTC23LQ6PF05 361 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 MSANTD1Q6ZTZ1 278 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 KDELC2Q7Z4H8 507 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 NANOGNBQ7Z5D8 188 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 GRASPQ7Z6J2 395 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ISCA2Q86U28 154 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TAC4Q86UU9 113 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 RETREG3Q86VR2 466 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ZFAND4Q86XD8 727 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 KRT73Q86Y46 540 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 KIAA1958Q8N8K9 716 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ARL10Q8N8L6 244 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PTGR2Q8N8N7 351 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 FLCNQ8NFG4 579 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 OR2T12Q8NG77 320 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 FBLIM1Q8WUP2 373 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PROX1Q92786 737 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 MYDGFQ969H8 173 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TMBIM1Q969X1 311 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 FKBP10Q96AY3 582 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 FBXL8Q96CD0 374 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TMCO6Q96DC7 493 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ZHX1-C8orf76Q96EF9 292 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 PHF21BQ96EK2 531 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 C1orf74Q96LT6 269 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 MAGEB10Q96LZ2 347 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms