RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 C17orf113A0A1B0GUU1 675 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 C5orf60A6NFR6 353 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 GOLGA6L19H0YKK7 550 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 E2F3O00716 465 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 LCE2BO14633 110 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 HCRTR1O43613 425 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 SGTAO43765 313 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 KDM1AO60341 852 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 CNOT3O75175 753 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 JRKO75564 520 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 GYPCP04921 128 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 UMODP07911 640 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 PIM1P11309 404 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 GRNP28799 593 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 MC4RP32245 332 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 ARHGAP25P42331 645 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TSFMP43897 325 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 CD151P48509 253 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 BOP1Q14137 746 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 PRPSAP1Q14558 356 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TLR1Q15399 786 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TUBB8Q3ZCM7 444 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 CRB2Q5IJ48 1285 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 ITPRIPL1Q6GPH6 555 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 UNC5AQ6ZN44 842 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 GDF7Q7Z4P5 450 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TMEM151BQ8IW70 566 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 METTL27Q8N6F8 245 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 BCORP1Q8N888 145 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 LRRC45Q96CN5 670 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 THOC3Q96J01 351 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 SOX17Q9H6I2 414 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZDHHC3Q9NYG2 299 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 SH3BGRL2Q9UJC5 107 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TRHDEQ9UKU6 1024 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 PLAGL1Q9UM63 463 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 PLCL2Q9UPR0 1127 aa10.1□□□□□ -0.79
CDC42BPB-207ENST00000560492 TRGV8A0A0C4DH27 118 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CCDC78A2IDD5 438 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 HEATR9A2RTY3 570 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CTSBP07858 339 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 MMP11P24347 488 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CTNNA2P26232 953 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CDKN2BP42772 138 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CSE1LP55060 971 aaKnown RBP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 KCNK10P57789 538 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 ARG2P78540 354 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 RPA4Q13156 261 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 OLIG2Q13516 323 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZIC1Q15915 447 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 B3GNTL1Q67FW5 361 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 SNX20Q7Z614 316 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 SERPINA9Q86WD7 417 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 RHOT2Q8IXI1 618 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 PRSS58Q8IYP2 241 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CLDN19Q8N6F1 224 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 OR1N1Q8NGS0 311 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 CCDC110Q8TBZ0 833 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 ELMO1Q92556 727 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 QKIQ96PU8 341 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 ALS2CR12Q96Q35 445 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 OR2A14Q96R47 310 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 BARD1Q99728 777 aaKnown RBP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 LHPPQ9H008 270 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 GBA3Q9H227 469 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 C10orf88Q9H8K7 445 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 SPTLC3Q9NUV7 552 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 SPHK1Q9NYA1 384 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 SMARCAL1Q9NZC9 954 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 KLHL20Q9Y2M5 609 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 POLEQ07864 2286 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 C2CD3Q4AC94 2353 aa10.09□□□□□ -0.79
CDC42BPB-207ENST00000560492 APCP25054 2843 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 A0A1B0GX78 115 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 DYTNA2CJ06 578 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 HACD1B0YJ81 288 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 STK10O94804 968 aaKnown RBP10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 TPM3P06753 285 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 COX6B1P14854 86 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 ITGAXP20702 1163 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 MAGP20916 626 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 COMTP21964 271 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 ACRV1P26436 265 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 PSMB4P28070 264 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 RBL1P28749 1068 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 SLC1A1P43005 524 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 CDKN1CP49918 316 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 ARSFP54793 590 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 SOX8P57073 446 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 XIAPP98170 497 aa10.08□□□□□ -0.8
CDC42BPB-207ENST00000560492 GPR33Q49SQ1 333 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms