RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 A0A087WUV0 522 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TRABD2BA6NFA1 517 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 C2orf74A8MZ97 194 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC16A5O15375 505 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 PSIP1O75475 530 aaKnown RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 C1orf105O95561 183 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 ITGA2BP08514 1039 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 JMJD7P0C870 316 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TYRP1P17643 537 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 FDXRP22570 491 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 SPRP35270 261 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC12A2P55011 1212 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 RAB15P59190 212 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 IL2P60568 153 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 MAGOHP61326 146 aaKnown RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 KIR2DS3Q14952 304 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 ARHGAP19Q14CB8 494 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 KLHL38Q2WGJ6 581 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TMEM164Q5U3C3 297 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 NAPRTQ6XQN6 538 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 FBXO39Q8N4B4 442 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 GPATCH11Q8N954 259 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 SIDT2Q8NBJ9 832 aaKnown RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 HMGCLL1Q8TB92 370 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 PDLIM5Q96HC4 596 aaKnown RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF578Q96N58 590 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 RBBP8Q99708 897 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 TWSG1Q9GZX9 223 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 SEMA6CQ9H3T2 930 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 C1GALT1Q9NS00 363 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 LGALS13Q9UHV8 139 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
PKNOX1-209ENST00000560448 B4E171 279 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 GFYI3L273 518 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 RGS16O15492 202 aaPredicted RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 MAP3K7O43318 606 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ZBTB14O43829 449 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 C1QAP02745 245 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 C8GP07360 202 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SPINK2P20155 84 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 MAP4P27816 1152 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 GCAP28676 217 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 RBMS1P29558 406 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TSPAN7P41732 249 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 GABREP78334 506 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ABRQ12979 859 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 NAA25Q14CX7 972 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 KBTBD12Q3ZCT8 623 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ACSBG2Q5FVE4 666 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 UNQ6494/PRO21346Q6UXR6 183 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CAPN12Q6ZSI9 719 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 BPHLQ86WA6 291 aaPredicted RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CTAGE3PQ8IX95 158 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 NKAPQ8N5F7 415 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 OR4E2Q8NGC2 313 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ASB11Q8WXH4 323 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 KLHL6Q8WZ60 621 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TEFMQ96QE5 360 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 NDNQ99608 321 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 GPR22Q99680 433 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ZPBPQ9BS86 351 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC86Q9H6F5 360 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ACSS3Q9H6R3 686 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 THSD1Q9NS62 852 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC39A10Q9ULF5 831 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SATB2Q9UPW6 733 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PCDHGA7Q9Y5G6 932 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PSAT1Q9Y617 370 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PRAMEF33A0A0G2JMD5 474 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 FAM95CA0A1B0GW59 222 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 OR6C74A6NCV1 312 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SMIM23A6NLE4 172 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 MSL3P1P0C860 447 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF37AP17032 561 aaPredicted RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CD82P27701 267 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PKLRP30613 574 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SLCO1A2P46721 670 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CLDN6P56747 220 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PPP2R2AP63151 447 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PRKG2Q13237 762 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 C3orf38Q5JPI3 329 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 RBM20Q5T481 1227 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 IRGCQ6NXR0 463 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 OR2L8Q8NGY9 312 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms