RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 LAMB3Q13751 1172 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 KRT33BQ14525 404 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 TERF2Q15554 542 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 IGFBP7Q16270 282 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 GPR33Q49SQ1 333 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ANKRD20A2Q5SQ80 823 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ANKRD20A1Q5TYW2 823 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ANKRD20A3Q5VUR7 823 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF449Q6P9G9 518 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 SNX20Q7Z614 316 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 KLHDC8BQ8IXV7 354 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 FAM26EQ8N5C1 309 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ARNT2Q9HBZ2 717 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 FARSAQ9Y285 508 aaKnown RBP13.18□□□□□ -0.3
SMAD3-214ENST00000560402 PCDHGB7Q9Y5F8 929 aa13.18□□□□□ -0.3
SMAD3-214ENST00000560402 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 H7C0S8 307 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 KCNN4O15554 427 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 MAP3K7O43318 606 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 SGTAO43765 313 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 TTC4O95801 387 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 ABHD2P08910 425 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 ATP1B2P14415 290 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-214ENST00000560402 CD151P48509 253 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 PGDP52209 483 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 RPA4Q13156 261 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 GPR19Q15760 415 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 HIF1AQ16665 826 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 CERS6Q6ZMG9 384 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 HPS6Q86YV9 775 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-214ENST00000560402 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 MR1Q95460 341 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 CDC42EP4Q9H3Q1 356 aaKnown RBP13.17□□□□□ -0.3
SMAD3-214ENST00000560402 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 ACSS2Q9NR19 701 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 ZDHHC3Q9NYG2 299 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 FAM8A1Q9UBU6 413 aa13.17□□□□□ -0.3
SMAD3-214ENST00000560402 G3BP2Q9UN86 482 aaKnown RBP13.17□□□□□ -0.3
SMAD3-214ENST00000560402 TNRC6AQ8NDV7 1962 aaKnown RBP13.17□□□□□ -0.3
SMAD3-214ENST00000560402 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 TRBV5-4A0A0C4DH59 114 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 K7EM74 188 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 QSOX1O00391 747 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 GP1BBP13224 206 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 CYP2A7P20853 494 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RPS18P62269 152 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 BASP1P80723 227 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 IL10RAQ13651 578 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 SLC29A2Q14542 456 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 TAOK1Q7L7X3 1001 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 DSELQ8IZU8 1212 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 RIBC1Q8N443 379 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 PGM2Q96G03 612 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 APOL2Q9BQE5 337 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 NLNQ9BYT8 704 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 PITPNM3Q9BZ71 974 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 SRMSQ9H3Y6 488 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
SMAD3-214ENST00000560402 SAYSD1Q9NPB0 183 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
SMAD3-214ENST00000560402 MED13Q9UHV7 2174 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 USP9XQ93008 2570 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 C2orf74A8MZ97 194 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 MEN1O00255 615 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 DNAJB5O75953 348 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 POLBP06746 335 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 HBQ1P09105 142 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ACRV1P26436 265 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 MC4RP32245 332 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 RORAP35398 523 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 MAGEA4P43358 317 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ARCN1P48444 511 aaKnown RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 LMAN1P49257 510 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ABRQ12979 859 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms