RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 HOXB3P14651 431 aaPredicted RBP21.02■□□□□ 0.96
SNX1-206ENST00000559389 CYP2A7P20853 494 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 MAP4P27816 1152 aaKnown RBP21.02■□□□□ 0.96
SNX1-206ENST00000559389 TYK2P29597 1187 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 SLC26A3P40879 764 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 GFERP55789 205 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 PHKG1Q16816 387 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 TMEM71Q6P5X7 295 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 SBSNQ6UWP8 590 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 B3GNT8Q7Z7M8 397 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 TBC1D1Q86TI0 1168 aaPredicted RBP21.02■□□□□ 0.96
SNX1-206ENST00000559389 TMPRSS12Q86WS5 348 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 CACTIN-AS1Q8N1I8 211 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 OR9A1PQ8NGU1 263 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 DEPDC7Q96QD5 511 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 OR6C2Q9NZP2 312 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 CLCA2Q9UQC9 943 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 PDE10AQ9Y233 779 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 ACOT9Q9Y305 439 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 PTPRBP23467 1997 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 IQANK1A0A1B0GTG1 560 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 CDC7O00311 574 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 MATN2O00339 956 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 BTN3A3O00478 584 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 ENO2P09104 434 aaPredicted RBP21.01■□□□□ 0.95
SNX1-206ENST00000559389 THRAP10827 490 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 CD1DP15813 335 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 SLCO1A2P46721 670 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 ATP6V0D1P61421 351 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PPP1CAP62136 330 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 IRF9Q00978 393 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 DLG1Q12959 904 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 CSHL1Q14406 222 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PPP1R3AQ16821 1122 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 ZNF574Q6ZN55 896 aaPredicted RBP21.01■□□□□ 0.95
SNX1-206ENST00000559389 TIFABQ6ZNK6 161 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 TMPRSS7Q7RTY8 843 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 ADAMTSL2Q86TH1 951 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PLXDC1Q8IUK5 500 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 ADGRF3Q8IZF5 1079 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 CENPLQ8N0S6 344 aaPredicted RBP21.01■□□□□ 0.95
SNX1-206ENST00000559389 GALNT15Q8N3T1 639 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 SPATA6LQ8N4H0 392 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 CHCHD4Q8N4Q1 142 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 RAB42Q8N4Z0 105 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 LINC01555Q8NAE3 123 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 OR2L8Q8NGY9 312 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 HMGCLL1Q8TB92 370 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 MZB1Q8WU39 189 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PKP4Q99569 1192 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PARVBQ9HBI1 364 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 IGSF5Q9NSI5 407 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 HRASLS2Q9NWW9 162 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 PDP2Q9P2J9 529 aa21.01■□□□□ 0.95
SNX1-206ENST00000559389 NOVA2Q9UNW9 492 aaKnown RBP21.01■□□□□ 0.95
SNX1-206ENST00000559389 IGHV5-10-1A0A0J9YXX1 117 aa21■□□□□ 0.95
SNX1-206ENST00000559389 SMIM23A6NLE4 172 aa21■□□□□ 0.95
SNX1-206ENST00000559389 CAPN5O15484 640 aaPredicted RBP21■□□□□ 0.95
SNX1-206ENST00000559389 CDH16O75309 829 aa21■□□□□ 0.95
SNX1-206ENST00000559389 CSO75390 466 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 CHRM5P08912 532 aaPredicted RBP21■□□□□ 0.95
SNX1-206ENST00000559389 POLR2CP19387 275 aaPredicted RBP21■□□□□ 0.95
SNX1-206ENST00000559389 CCKBRP32239 447 aa21■□□□□ 0.95
SNX1-206ENST00000559389 ZFP36L1Q07352 338 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 ARHGAP19Q14CB8 494 aa21■□□□□ 0.95
SNX1-206ENST00000559389 TSNQ15631 228 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 CYP2A13Q16696 494 aa21■□□□□ 0.95
SNX1-206ENST00000559389 ISXQ2M1V0 245 aa21■□□□□ 0.95
SNX1-206ENST00000559389 ANKS6Q68DC2 871 aa21■□□□□ 0.95
SNX1-206ENST00000559389 IRGCQ6NXR0 463 aa21■□□□□ 0.95
SNX1-206ENST00000559389 MCOLN3Q8TDD5 553 aa21■□□□□ 0.95
SNX1-206ENST00000559389 KCTD4Q8WVF5 259 aa21■□□□□ 0.95
SNX1-206ENST00000559389 HNRNPLLQ8WVV9 542 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 TMEM74Q96NL1 305 aa21■□□□□ 0.95
SNX1-206ENST00000559389 UNKQ9C0B0 810 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 SEMA6CQ9H3T2 930 aa21■□□□□ 0.95
SNX1-206ENST00000559389 TBK1Q9UHD2 729 aa21■□□□□ 0.95
SNX1-206ENST00000559389 TLK1Q9UKI8 766 aa21■□□□□ 0.95
SNX1-206ENST00000559389 POMT2Q9UKY4 750 aa21■□□□□ 0.95
SNX1-206ENST00000559389 PLAAQ9Y263 795 aa21■□□□□ 0.95
SNX1-206ENST00000559389 CNOT1A5YKK6 2376 aaKnown RBP21■□□□□ 0.95
SNX1-206ENST00000559389 HYAL3O43820 417 aaPredicted RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 RFPL1O75677 317 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 SLC16A8O95907 504 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 SYF2O95926 243 aaKnown RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 MPOP05164 745 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 LTA4HP09960 611 aaKnown RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 PEBP1P30086 187 aaKnown RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 INHBCP55103 352 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 IFFO1Q0D2I5 559 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 FOXC1Q12948 553 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 PRKAA1Q13131 559 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 BEND6Q5SZJ8 279 aaPredicted RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 ARMC6Q6NXE6 501 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 RIBC1Q8N443 379 aaPredicted RBP20.99■□□□□ 0.95
SNX1-206ENST00000559389 CCDC74BQ96LY2 380 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 TGM7Q96PF1 710 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 CD180Q99467 661 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 VPS11Q9H270 941 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 ACTR10Q9NZ32 417 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms