RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PRDX3P30048 256 aaKnown RBP18.11■□□□□ 0.49
CASC4-209ENST00000559222 SHMT2P34897 504 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 EIF2S3P41091 472 aaKnown RBP18.11■□□□□ 0.49
CASC4-209ENST00000559222 MC2RQ01718 297 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ZNF460Q14592 562 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ARMC6Q6NXE6 501 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 PAQR3Q6TCH7 311 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ZC3HC1Q86WB0 502 aaKnown RBP18.11■□□□□ 0.49
CASC4-209ENST00000559222 RASGRP3Q8IV61 690 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 EEF1AKMT1Q8WVE0 214 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 INPP5DQ92835 1189 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 CRELD1Q96HD1 420 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 SLC41A2Q96JW4 573 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 OR2A14Q96R47 310 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 FAM114A2Q9NRY5 505 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 AKAP7Q9P0M2 348 aaPredicted RBP18.11■□□□□ 0.49
CASC4-209ENST00000559222 TRMT6Q9UJA5 497 aaKnown RBP18.11■□□□□ 0.49
CASC4-209ENST00000559222 IKZF3Q9UKT9 509 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 PCDHGA7Q9Y5G6 932 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 COMMD10Q9Y6G5 202 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 ACACAQ13085 2346 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 BAHCC1Q9P281 2608 aa18.11■□□□□ 0.49
CASC4-209ENST00000559222 PIPSLA2A3N6 862 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 SLC9B1P1A6NJY1 282 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 FAM159BA6NKW6 160 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 B4E171 279 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
CASC4-209ENST00000559222 FAM155BO75949 473 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 RHOXF2BP0C7M4 288 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
CASC4-209ENST00000559222 TSPAN7P41732 249 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 PCBP4P57723 403 aaKnown RBP18.1■□□□□ 0.49
CASC4-209ENST00000559222 PRKAA1Q13131 559 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 SRSF6Q13247 344 aaKnown RBP18.1■□□□□ 0.49
CASC4-209ENST00000559222 FASTKQ14296 549 aaKnown RBP18.1■□□□□ 0.49
CASC4-209ENST00000559222 TGIF1Q15583 401 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 TMEM207Q6UWW9 146 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 C3orf62Q6ZUJ4 267 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 DLG3Q92796 817 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 TAAR9Q96RI9 348 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 RHOXF2Q9BQY4 288 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 L2HGDHQ9H9P8 463 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 NINJ2Q9NZG7 142 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 ADAMTS6Q9UKP5 1117 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 KLHL20Q9Y2M5 609 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 ANKRD12Q6UB98 2062 aa18.1■□□□□ 0.49
CASC4-209ENST00000559222 ZZEF1O43149 2961 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 FAM95CA0A1B0GW59 222 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 C2orf74A8MZ97 194 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 RASGRF2O14827 1237 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 NVLO15381 856 aaKnown RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 TOX3O15405 576 aaPredicted RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 TIAF1O95411 115 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 TSPAN12O95859 305 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 MPC1LP0DKB6 136 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 ZNF28P17035 718 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 SAT1P21673 171 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 CDH3P22223 829 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 PSMB5P28074 263 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 MLLT3P42568 568 aaPredicted RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 RAB28P51157 221 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 FOXM1Q08050 763 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 COL9A2Q14055 689 aaPredicted RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 GPR19Q15760 415 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 ZIC1Q15915 447 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 TTLL9Q3SXZ7 439 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 KBTBD12Q3ZCT8 623 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 GLE1Q53GS7 698 aaKnown RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 SPESP1Q6UW49 350 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 SLC26A11Q86WA9 606 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 FBF1Q8TES7 1133 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 UBXN4Q92575 508 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 OR6C1Q96RD1 312 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 CD180Q99467 661 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 TAS2R13Q9NYV9 303 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 KLHL42Q9P2K6 505 aa18.09■□□□□ 0.49
CASC4-209ENST00000559222 MTO1Q9Y2Z2 717 aaKnown RBP18.09■□□□□ 0.49
CASC4-209ENST00000559222 TEX51A0A1B0GUA7 166 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 HCRTR1O43613 425 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 CD9P21926 228 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 GMPRP36959 345 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 TAS2R39P59534 338 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 YBX1P67809 324 aaKnown RBP18.08■□□□□ 0.48
CASC4-209ENST00000559222 CLN3Q13286 438 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 FAM45BPQ6NSW5 357 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 NEK10Q6ZWH5 1172 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 CEP97Q8IW35 865 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 SPACA3Q8IXA5 215 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 GSPT2Q8IYD1 628 aaKnown RBP18.08■□□□□ 0.48
CASC4-209ENST00000559222 OR2L8Q8NGY9 312 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 GABPB2Q8TAK5 448 aaPredicted RBP18.08■□□□□ 0.48
CASC4-209ENST00000559222 FAM45AQ8TCE6 357 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 LINGO1Q96FE5 620 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 VPS39Q96JC1 886 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 TRAPPC9Q96Q05 1148 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 PKP4Q99569 1192 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 CAB39LQ9H9S4 337 aa18.08■□□□□ 0.48
CASC4-209ENST00000559222 OR6C2Q9NZP2 312 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms