RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TRAM1L1Q8N609 369 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 FBXO27Q8NI29 283 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 SNRNP27Q8WVK2 155 aaKnown RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 KRT35Q92764 455 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 NKD1Q969G9 470 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 KIAA1143Q96AT1 154 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 WBP1Q96G27 269 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 PEX11GQ96HA9 241 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 RHOVQ96L33 236 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 FICDQ9BVA6 458 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 GPN2Q9H9Y4 310 aaPredicted RBP7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A7Q9HAW7 530 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A10Q9HAW8 530 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 UGT1A8Q9HAW9 530 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 MAGEE1Q9HCI5 957 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 TRIM39Q9HCM9 518 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 FAM153AQ9UHL3 310 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 PSMD13Q9UNM6 376 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 ALG6Q9Y672 507 aa7.19□□□□□ -1.26
SPG11-213ENST00000558988 NBEAQ8NFP9 2946 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 CELSR3Q9NYQ7 3312 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 A6NCN8 305 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ZNF487B1APH4 448 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 B4E171 279 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 POLR1CO15160 346 aaPredicted RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 NKX2-8O15522 239 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 PSTPIP1O43586 416 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 KIF1CO43896 1103 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 STK17BO94768 372 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 UBXN7O94888 489 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ZRANB2O95218 330 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-213ENST00000558988 AGTP01019 485 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 PTMAP06454 111 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 VCLP18206 1134 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 IDSP22304 550 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 SPAM1P38567 509 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 TSPAN7P41732 249 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 DCDC1P59894 354 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 TMPRSS15P98073 1019 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 WASHC5Q12768 1159 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 OLIG2Q13516 323 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 GPR18Q14330 331 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 CLCA4Q14CN2 919 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 NRN1LQ496H8 165 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 TFDP3Q5H9I0 405 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 COLEC12Q5KU26 742 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ATP1A1-AS1Q5TC04 95 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 WDR74Q6RFH5 385 aaPredicted RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 KDELC1Q6UW63 502 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 CEACAM20Q6UY09 585 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ARHGEF18Q6ZSZ5 1173 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 TMEM26Q6ZUK4 368 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 BZW1Q7L1Q6 419 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 DAAM2Q86T65 1068 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 PTRH1Q86Y79 214 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 PLXDC1Q8IUK5 500 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 RASGRP3Q8IV61 690 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 NLGN4XQ8N0W4 816 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ZNF567Q8N184 647 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 NLGN4YQ8NFZ3 816 aaPredicted RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 RSC1A1Q92681 617 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 RTP4Q96DX8 246 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 OXNAD1Q96HP4 312 aaPredicted RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 TEKT5Q96M29 485 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 QKIQ96PU8 341 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-213ENST00000558988 DPYSL5Q9BPU6 564 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 DDA1Q9BW61 102 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ASPSCR1Q9BZE9 553 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 ULBP3Q9BZM4 244 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 IMP3Q9NV31 184 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 ZNF624Q9P2J8 865 aaPredicted RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 FBLN5Q9UBX5 448 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 INTUQ9ULD6 942 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-213ENST00000558988 PKP3Q9Y446 797 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 PCDHA13Q9Y5I0 950 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 CFAP20Q9Y6A4 193 aaKnown RBP7.18□□□□□ -1.26
SPG11-213ENST00000558988 SLC30A1Q9Y6M5 507 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 COL6A6A6NMZ7 2263 aa7.18□□□□□ -1.26
SPG11-213ENST00000558988 hCG_1818297A0A087WSY0 165 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 GLYATL1P3A0A0U1RQE8 302 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 LOC101059948A0A1B0GTJ6 334 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 LILRA5A6NI73 299 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 OR5K4A6NMS3 321 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 ZNF891A8MT65 544 aaPredicted RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 CCL22O00626 93 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 STX7O15400 261 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 MTSS1O43312 755 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 VEGFDO43915 354 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 KATNA1O75449 491 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 IPO7O95373 1038 aaKnown RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 VAMP1P23763 118 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 RBL1P28749 1068 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 CA5AP35218 305 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 CYLC1P35663 651 aaPredicted RBP7.17□□□□□ -1.26
SPG11-213ENST00000558988 HALP42357 657 aa7.17□□□□□ -1.26
SPG11-213ENST00000558988 NR2C2P49116 596 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms