RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TMEM221A6NGB7 291 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 IGLON5A6NGN9 336 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 M0R296 226 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 GIPC1O14908 333 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 KRT36O76013 467 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 CHEK2O96017 543 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 EBLN1P0CF75 366 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 EPB42P16452 691 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 ZNF8P17098 575 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 CAPN3P20807 821 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 HNMTP50135 292 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 FGL2Q14314 439 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 WSCD2Q2TBF2 565 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PTCHD3Q3KNS1 767 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PIGGQ5H8A4 983 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 MILR1Q7Z6M3 343 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 TCAIMQ8N3R3 496 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 SKA2Q8WVK7 121 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 USP7Q93009 1102 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 TMEM159Q96B96 161 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 FBXL8Q96CD0 374 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 TPSD1Q9BZJ3 242 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 EFCAB1Q9HAE3 211 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 TRIM39Q9HCM9 518 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 ZFR2Q9UPR6 939 aaKnown RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 CHUKO15111 745 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 SNRPB2P08579 225 aaKnown RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 C7P10643 843 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 IDO1P14902 403 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 CYP2A7P20853 494 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PIK3CGP48736 1102 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PFN3P60673 137 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 ERVK-8P63133 956 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 MAPRE2Q15555 327 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 GSTA3Q16772 222 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 GGTA1PQ4G0N0 100 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 IL27RAQ6UWB1 636 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 SPATA19Q7Z5L4 167 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 KLHDC8AQ8IYD2 350 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 FBXW8Q8N3Y1 598 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PYCR2Q96C36 320 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 ACTL8Q9H568 366 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 WDR41Q9HAD4 459 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 FARSBQ9NSD9 589 aaKnown RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PRPF19Q9UMS4 504 aaKnown RBP12.61□□□□□ -0.39
SMAD3-207ENST00000558763 POMPQ9Y244 141 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 PCDHGA7Q9Y5G6 932 aa12.61□□□□□ -0.39
SMAD3-207ENST00000558763 C9JVG2 144 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 H0Y3Z8 333 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 PSMG1O95456 288 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 GNAZP19086 355 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 BDKRB1P46663 353 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 TPMTP51580 245 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 THOP1P52888 689 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 NME5P56597 212 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ABRQ12979 859 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ZNF423Q2M1K9 1284 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 SYTL3Q4VX76 610 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 MYLK4Q86YV6 388 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 MIER2Q8N344 545 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 OR14C36Q8NHC7 312 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 MCOLN3Q8TDD5 553 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ATP6V1E2Q96A05 226 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 C1orf50Q9BV19 199 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 LGR4Q9BXB1 951 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ZCCHC2Q9C0B9 1178 aaKnown RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 DCLRE1BQ9H816 532 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 DLGAP2Q9P1A6 1054 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ASPDHA6ND91 283 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 FFAR3O14843 346 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 LIN7AO14910 233 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ANKRD28O15084 1053 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 GPR42O15529 346 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 NRP2O60462 931 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 WDR47O94967 919 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 EZRP15311 586 aaKnown RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 STX1BP61266 288 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 CDK3Q00526 305 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 GRIK2Q13002 908 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 STX5Q13190 355 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 CCNIQ14094 377 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 RCAN2Q14206 197 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 C1orf146Q5VVC0 180 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 BNC2Q6ZN30 1099 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 FAM83HQ6ZRV2 1179 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 TRAPPC5Q8IUR0 188 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms