RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 UTS2BQ765I0 119 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 LUZP2Q86TE4 346 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 RALGPS2Q86X27 583 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ZDHHC13Q8IUH4 622 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ADHFE1Q8IWW8 467 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CCDC36Q8IYA8 594 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 LILRA2Q8N149 483 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 OR8H2Q8N162 312 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ZNF786Q8N393 782 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TMEM199Q8N511 208 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TBC1D19Q8N5T2 526 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 PTGR2Q8N8N7 351 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 C2orf69Q8N8R5 385 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 SNX31Q8N9S9 440 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TTC29Q8NA56 475 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 FAM47BQ8NA70 645 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 FNDC5Q8NAU1 212 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 SRFBP1Q8NEF9 429 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ZMIZ2Q8NF64 920 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 SPATA22Q8NHS9 363 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ADAM32Q8TC27 787 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 LRRC20Q8TCA0 184 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 IFI44Q8TCB0 444 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 BLOC1S5Q8TDH9 187 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 IPCEF1Q8WWN9 437 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 JPH3Q8WXH2 748 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 LRTOMTQ8WZ04 291 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 EDEM1Q92611 657 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 PMEPA1Q969W9 287 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 RAB7BQ96AH8 199 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 RAD51AP1Q96B01 352 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TADA1Q96BN2 335 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 MSANTD3Q96H12 275 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CELF6Q96J87 481 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 MAP6Q96JE9 813 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 C7orf34Q96L11 122 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 TMEM68Q96MH6 324 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 KLHL32Q96NJ5 620 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CCDC115Q96NT0 180 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 DEPDC7Q96QD5 511 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ZNF382Q96SR6 550 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 RBM4BQ9BQ04 359 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 APOL2Q9BQE5 337 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 PELOQ9BRX2 385 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 RBM4Q9BWF3 364 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 QRSL1Q9H0R6 528 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ALG9Q9H6U8 611 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ATP13A3Q9H7F0 1226 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 AKTIPQ9H8T0 292 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 AGO3Q9H9G7 860 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 NT5MQ9NPB1 228 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CCNB1IP1Q9NPC3 277 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ANLNQ9NQW6 1124 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 PRDM5Q9NQX1 630 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 AIG1Q9NVV5 245 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 NLE1Q9NVX2 485 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CCDC59Q9P031 241 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 IFT80Q9P2H3 777 aaPredicted RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 DPP7Q9UHL4 492 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 C3orf18Q9UK00 162 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 POU2F3Q9UKI9 436 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 BAG5Q9UL15 447 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 SPATA2Q9UM82 520 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 GTF2A1LQ9UNN4 478 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 ST3GAL5Q9UNP4 418 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 AURKCQ9UQB9 309 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 DTX4Q9Y2E6 619 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 CHTOPQ9Y3Y2 248 aaKnown RBP5.4□□□□□ -1.54
GABPB1-207ENST00000558335 MAU2Q9Y6X3 613 aa5.4□□□□□ -1.54
GABPB1-207ENST00000558335 MYO16Q9Y6X6 1858 aa5.4□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF638Q14966 1978 aaKnown RBP5.4□□□□□ -1.55
GABPB1-207ENST00000558335 GBF1Q92538 1859 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 DOCK4Q8N1I0 1966 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-207ENST00000558335 PQLC2LA1A4F0 135 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 CCDC78A2IDD5 438 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 MANSC4A6NHS7 340 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-207ENST00000558335 E5RI56 91 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 F8W036 122 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 PER2O15055 1255 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 KIAA0355O15063 1070 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 ARPC2O15144 300 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 TREHO43280 583 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 DFNA5O60443 496 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 GMDSO60547 372 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 PRAMEF11O60813 436 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 ATG13O75143 517 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 CLDN11O75508 207 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 KCNH1O95259 989 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 LATS1O95835 1130 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 MT-CYBP00156 380 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-207ENST00000558335 GNRH1P01148 92 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 AMHP03971 560 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 PDGFAP04085 211 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 ANXA6P08133 673 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 PRR35P0CG20 571 aa5.39□□□□□ -1.55
GABPB1-207ENST00000558335 DBTP11182 482 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms