RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PHTF2Q8N3S3 785 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 LIX1Q8N485 282 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 OR10H4Q8NGA5 316 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 JOSD2Q8TAC2 188 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 SSX3Q99909 188 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 FUNDC2Q9BWH2 189 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 PORCNQ9H237 461 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ELAC1Q9H777 363 aaKnown RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TRIM36Q9NQ86 728 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 CHRAC1Q9NRG0 131 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 MIOSQ9NXC5 875 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TMEM5Q9Y2B1 443 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TMX2Q9Y320 296 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TSTD3H0UI37 97 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 NARSO43776 548 aaKnown RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 HCN1O60741 890 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 PSMD10O75832 226 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 AMHP03971 560 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 SAGP10523 405 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 IL1R1P14778 569 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 FNTBP49356 437 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TAS2R43P59537 309 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 CARM1Q86X55 608 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TMC8Q8IU68 726 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ZNF675Q8TD23 568 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 SGCDQ92629 289 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ZDHHC15Q96MV8 337 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 PHB2Q99623 299 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TISP43B9A030 160 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 RFPL3O75679 317 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 TPPPO94811 219 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 PAK4O96013 591 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 SLC25A52Q3SY17 297 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 NKAPLQ5M9Q1 402 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ANKRD54Q6NXT1 300 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 Q8N402 240 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 FIBCD1Q8N539 461 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ATG4CQ96DT6 458 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 PYURFQ96I23 114 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 UCK2Q9BZX2 261 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 ARL6Q9H0F7 186 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 THUMPD1Q9NXG2 353 aaKnown RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 RBM7Q9Y580 266 aaKnown RBP11.55□□□□□ -0.56
CSPG4P12-201ENST00000558282 A0A1W2PRQ8 180 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 HMX3A6NHT5 357 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SLC15A5A6NIM6 579 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PAHP00439 452 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 GPX6P59796 221 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 HERVK_113P63132 956 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SLC13A2Q13183 592 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 DOK6Q6PKX4 331 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 UGT2A3Q6UWM9 527 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 IGFN1Q86VF2 1251 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 LGI2Q8N0V4 545 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 BARD1Q99728 777 aaKnown RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 ERVK-6Q9BXR3 956 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 ANKRD60Q9BZ19 345 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 EXO5Q9H790 373 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 TLE6Q9H808 572 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PTTG3PQ9NZH4 202 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PCDHB5Q9Y5E4 795 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 TRAPPC13A5PLN9 417 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PRORSD1PA6NEY8 169 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SSX5O60225 188 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 NTSR2O95665 410 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 POU2F1P14859 743 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 RAB3BP20337 219 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PIK3CBP42338 1070 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 RGS8P57771 180 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 ZMYND11Q15326 602 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 CCDC58Q4VC31 144 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SYNPOQ8N3V7 929 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 ZNF557Q8N988 423 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 OR5T2Q8NGG2 359 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 OR4C6Q8NH72 309 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 THRSPQ92748 146 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 FDXACB1Q9BRP7 624 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 RIOK2Q9BVS4 552 aaKnown RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 TFB2MQ9H5Q4 396 aaKnown RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 BRD7Q9NPI1 651 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 KCTD5Q9NXV2 234 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SCP2D1Q9UJQ7 156 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 TLR6Q9Y2C9 796 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 EXOSC1Q9Y3B2 195 aaKnown RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 NOP16Q9Y3C1 178 aaKnown RBP11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SULT1C2O00338 296 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 IL1BP01584 269 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 KCNA5P22460 613 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 SNTA1Q13424 505 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 GTF2H2Q13888 395 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 MFSD10Q14728 455 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 PGM5Q15124 567 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 UBE2UQ5VVX9 321 aa11.54□□□□□ -0.56
CSPG4P12-201ENST00000558282 GTF2H2CQ6P1K8 395 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms