RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 APIPQ96GX9 242 aa10.3□□□□□ -0.76
TPM1-210ENST00000558264 PRPF18Q99633 342 aaKnown RBP10.3□□□□□ -0.76
TPM1-210ENST00000558264 CGREF1Q99674 301 aa10.3□□□□□ -0.76
TPM1-210ENST00000558264 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
TPM1-210ENST00000558264 TRIM15Q9C019 465 aa10.3□□□□□ -0.76
TPM1-210ENST00000558264 PDP2Q9P2J9 529 aa10.3□□□□□ -0.76
TPM1-210ENST00000558264 RAB26Q9ULW5 256 aa10.3□□□□□ -0.76
TPM1-210ENST00000558264 ARHGEF33A8MVX0 844 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CFAP99D6REC4 459 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 SLC28A1O00337 649 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 IFRD1O00458 451 aaPredicted RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 AREL1O15033 823 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 DENRO43583 198 aaKnown RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 NUAK1O60285 661 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 FGF19O95750 216 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 ETS2P15036 469 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 ZNF30P17039 623 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 EFNA1P20827 205 aaPredicted RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 NFKBIAP25963 317 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 ST8SIA6P61647 398 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 FOXM1Q08050 763 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 DMC1Q14565 340 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 KIAA0040Q15053 153 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 MARVELD2Q8N4S9 558 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 DTWD1Q8N5C7 304 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 TSPEARQ8WU66 669 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 FIG4Q92562 907 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 ZUFSPQ96AP4 578 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 APOLD1Q96LR9 279 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 MTERF1Q99551 399 aaKnown RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 ZBTB18Q99592 522 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CENPKQ9BS16 269 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 Q9H521 79 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 HPS4Q9NQG7 708 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 C1orf109Q9NX04 203 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 OAZ3Q9UMX2 235 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 SLC8A2Q9UPR5 921 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 PRKAB1Q9Y478 270 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 TRANK1O15050 2925 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 TCRBV5S2A0A599 114 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CLIC3O95833 236 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 KRT6AP02538 564 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 KRT6BP04259 564 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 C8GP07360 202 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 SMIM18P0DKX4 95 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CYP2A7P20853 494 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 IL10P22301 178 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 JAK1P23458 1154 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 MMP12P39900 470 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 KRT6CP48668 564 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 CHIT1Q13231 466 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 MAPKAPK3Q16644 382 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 PGS1Q32NB8 556 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 FAM78AQ5JUQ0 283 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 GLYATQ6IB77 296 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 TMEM220Q6QAJ8 160 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 TRIM46Q7Z4K8 759 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 KIAA0907Q7Z7F0 614 aaPredicted RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 TMEM126BQ8IUX1 230 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 C10orf111Q8N326 155 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 FAM86B1Q8N7N1 296 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 VN1R2Q8NFZ6 395 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 OR10A6Q8NH74 314 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 MCOLN3Q8TDD5 553 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 USP7Q93009 1102 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 BIRC7Q96CA5 298 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 RNF145Q96MT1 663 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 SOX17Q9H6I2 414 aaPredicted RBP10.29□□□□□ -0.76
TPM1-210ENST00000558264 ARMC1Q9NVT9 282 aa10.29□□□□□ -0.76
TPM1-210ENST00000558264 AQP12BA6NM10 295 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 E7EQ34 232 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 SPINT1O43278 529 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 PGRP06401 933 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ENO2P09104 434 aaPredicted RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 GNAO1P09471 354 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 CD22P20273 847 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 NRIP1P48552 1158 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 PFN3P60673 137 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 PHC1P78364 1004 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 TMEM115Q12893 351 aaPredicted RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 NAE1Q13564 534 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 GBX1Q14549 363 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 USP39Q53GS9 565 aaKnown RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 GET4Q7L5D6 327 aaPredicted RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 CYP2U1Q7Z449 544 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 AQP12AQ8IXF9 295 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 TRAM1L1Q8N609 369 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 CELF5Q8N6W0 485 aaKnown RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 OR10Q1Q8NGQ4 319 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 BTN2A2Q8WVV5 523 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ASZ1Q8WWH4 475 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 GTF2H4Q92759 462 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 GLYATL1Q969I3 302 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 OR52E6Q96RD3 313 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 C19orf43Q9BQ61 176 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 INPP5KQ9BT40 448 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 SLC25A37Q9NYZ2 338 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms