RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PPP3CCP48454 512 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 RASSF2P50749 326 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 DUSP3P51452 185 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 IL9RQ01113 521 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 GPR18Q14330 331 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 ESPL1Q14674 2120 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 RPE65Q16518 533 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 SLC18A3Q16572 532 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 TPGS2Q68CL5 300 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 CD300LGQ6UXG3 332 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 Q6ZTK2 550 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 TBC1D1Q86TI0 1168 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 LRRTM4Q86VH4 590 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 ZNF410Q86VK4 478 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 MCEMP1Q8IX19 187 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 CNPY4Q8N129 248 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 FBXL14Q8N1E6 418 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 GABPB2Q8TAK5 448 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 HTR3CQ8WXA8 447 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 MAELQ96JY0 434 aaKnown RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 LURAP1Q96LR2 239 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 RSPH9Q9H1X1 276 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 HIPK2Q9H2X6 1198 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 ZDHHC4Q9NPG8 344 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 BLOC1S4Q9NUP1 217 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 EXOC6BQ9Y2D4 811 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 CRYL1Q9Y2S2 319 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 ZFC3H1O60293 1989 aaKnown RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 ARHGAP10A1A4S6 786 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 MEI4A8MW99 385 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 CDRT15L2A8MXV6 281 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 FAM157AC9JC47 383 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 K7ENM7 598 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 ADAP00813 363 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 LDLRP01130 860 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 HOXB6P17509 224 aaKnown RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 CCKARP32238 428 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 MLLT10P55197 1068 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 ARPP19P56211 112 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 NUCB1Q02818 461 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 ME3Q16798 604 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 KCNT1Q5JUK3 1230 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 C1QTNF12Q5T7M4 302 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 OTUD1Q5VV17 481 aaPredicted RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 ATG16L1Q676U5 607 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 SERPINA11Q86U17 422 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 ERC1Q8IUD2 1116 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 FAM114A1Q8IWE2 563 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 GHDCQ8N2G8 530 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 NUP210Q8TEM1 1887 aaPredicted RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 USP13Q92995 863 aaPredicted RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 MTMR9Q96QG7 549 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 SEC62Q99442 399 aaKnown RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 TMEM204Q9BSN7 226 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 UNC45AQ9H3U1 944 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 KLHL31Q9H511 634 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 CATSPERBQ9H7T0 1116 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 PRKRIP1Q9H875 184 aaPredicted RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 MINDY3Q9H8M7 445 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 ECHDC1Q9NTX5 307 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 SEL1LQ9UBV2 794 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 BAZ2BQ9UIF8 2168 aaKnown RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 YIPF1Q9Y548 306 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 CLDN16Q9Y5I7 305 aa5.78□□□□□ -1.48
RTF1-204ENST00000558117 NSD1Q96L73 2696 aaPredicted RBP5.78□□□□□ -1.48
RTF1-204ENST00000558117 IGKV6-21A0A0C4DH24 114 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 A0A1B0GTQ1 180 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 A0A1W2PQF6 199 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 TSPAN3O60637 253 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 RTN2O75298 545 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 VNN2O95498 520 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 NADKO95544 446 aaPredicted RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 IL1AP01583 271 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 ARSBP15848 533 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 GABRR2P28476 465 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 ARRB2P32121 409 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 RFC1P35251 1148 aaPredicted RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 AVPR1AP37288 418 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 RFX2P48378 723 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 PMS2P54278 862 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 ROR2Q01974 943 aaKnown RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 CYP4A11Q02928 519 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 NAB2Q15742 525 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 DCAF12L2Q5VW00 463 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 CMTM8Q8IZV2 173 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 CADM3Q8N126 398 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 KBTBD3Q8NAB2 608 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 CADM4Q8NFZ8 388 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 OR4N2Q8NGD1 307 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 BICD2Q8TD16 824 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 PDCD6IPQ8WUM4 868 aaKnown RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 HSPH1Q92598 858 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 MXRA8Q9BRK3 442 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 NTPCRQ9BSD7 190 aaKnown RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 NXF3Q9H4D5 531 aaKnown RBP5.77□□□□□ -1.49
RTF1-204ENST00000558117 PLAC1Q9HBJ0 212 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 PLK2Q9NYY3 685 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 SUFUQ9UMX1 484 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms