RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CCL4P13236 92 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 MAP4P27816 1152 aaKnown RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 TNFRSF8P28908 595 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 ETV5P41161 510 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 RAB28P51157 221 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 POU4F1Q01851 419 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 CYP4F3Q08477 520 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 BMPR2Q13873 1038 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 UBE2R2Q712K3 238 aaPredicted RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 ARHGAP22Q7Z5H3 698 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 TRIM73Q86UV7 250 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 FAM129CQ86XR2 697 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 AGBL5Q8NDL9 886 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 MDM1Q8TC05 714 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 MAGEC3Q8TD91 643 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 ASB11Q8WXH4 323 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 UBXN4Q92575 508 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 CMKLR1Q99788 373 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 MENTQ9BUN1 341 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 FUT8Q9BYC5 575 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 TXLNGYQ9BZA5 131 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 NRSN2Q9GZP1 204 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 RAB33BQ9H082 229 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 GPAMQ9HCL2 828 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 OR6C2Q9NZP2 312 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 ADAMTS6Q9UKP5 1117 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 POMT2Q9UKY4 750 aa13.89□□□□□ -0.19
USP3-205ENST00000557884 COL27A1Q8IZC6 1860 aaPredicted RBP13.89□□□□□ -0.19
USP3-205ENST00000557884 A0A087WUV0 522 aaPredicted RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 IGHV5-51A0A0C4DH38 117 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 PIPSLA2A3N6 862 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 TLCD2A6NGC4 264 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 EFCAB7A8K855 629 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 C2orf74A8MZ97 194 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 ISM1B1AKI9 464 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 POC1B-GALNT4F8VUJ3 575 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 GFYI3L273 518 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 HGSO14964 777 aaPredicted RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 RIPK2O43353 540 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 BRINP1O60477 761 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 TNFSF15O95150 251 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 UGT2B7P16662 529 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 ZNF37AP17032 561 aaPredicted RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 PRDX3P30048 256 aaKnown RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 PEBP1P30086 187 aaKnown RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 GMPRP36959 345 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 LSSP48449 732 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 MAPK10P53779 464 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 EIF3IQ13347 325 aaKnown RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 ERCC6LQ2NKX8 1250 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 MROH9Q5TGP6 573 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 LRRC8EQ6NSJ5 796 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 UNQ6494/PRO21346Q6UXR6 183 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 PRSS42Q7Z5A4 293 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 FAM20CQ8IXL6 584 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 EIF1ADQ8N9N8 165 aaKnown RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 DENND1AQ8TEH3 1009 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 ANKRD49Q8WVL7 239 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 DLG3Q92796 817 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 TSPAN17Q96FV3 270 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 PKP4Q99569 1192 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 UNKQ9C0B0 810 aaKnown RBP13.88□□□□□ -0.19
USP3-205ENST00000557884 OCIAD1Q9NX40 245 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 IKZF3Q9UKT9 509 aa13.88□□□□□ -0.19
USP3-205ENST00000557884 PTPRBP23467 1997 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 IGF2RP11717 2491 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 MYO1CO00159 1063 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 MATN2O00339 956 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 ZBTB14O43829 449 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 C8GP07360 202 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 INHBAP08476 426 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 ABHD2P08910 425 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 ANKRD34CP0C6C1 535 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 PVRP15151 417 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 STMN1P16949 149 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 CDH3P22223 829 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 RBMS1P29558 406 aaKnown RBP13.87□□□□□ -0.19
USP3-205ENST00000557884 TUBB4BP68371 445 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 SH3BP2P78314 561 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
USP3-205ENST00000557884 TSTA3Q13630 321 aaPredicted RBP13.87□□□□□ -0.19
USP3-205ENST00000557884 FASTKQ14296 549 aaKnown RBP13.87□□□□□ -0.19
USP3-205ENST00000557884 KCNAB1Q14722 419 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 RTP5Q14D33 572 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 SPESP1Q6UW49 350 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 MBOAT1Q6ZNC8 495 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 RASGRP3Q8IV61 690 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 RAB42Q8N4Z0 105 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 NKAPQ8N5F7 415 aaKnown RBP13.87□□□□□ -0.19
USP3-205ENST00000557884 OR2L8Q8NGY9 312 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
USP3-205ENST00000557884 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms