RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 PHPT1Q9NRX4 125 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 NKIRAS1Q9NYS0 192 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 STOML1Q9UBI4 398 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 SUCOQ9UBS9 1254 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 NTNG1Q9Y2I2 539 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 SNX24Q9Y343 169 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PCDHB4Q9Y5E5 795 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 MN1Q10571 1320 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CACNA1CQ13936 2221 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 VPS13CQ709C8 3753 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 IGLV3-10A0A075B6K4 115 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TLDC2A0PJX2 215 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CFAP69A5D8W1 941 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 E2F3O00716 465 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TOX3O15405 576 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 PRPF4O43172 522 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 THAP12O43422 761 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 KLHL41O60662 606 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 RECQL5O94762 991 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ZWINTO95229 277 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ATE1O95260 518 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TIAF1O95411 115 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TTC4O95801 387 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 F9P00740 461 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CEACAM5P06731 702 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TPBGLP0DKB5 382 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 FGF5P12034 268 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TNFAIP3P21580 790 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 DNAJA1P31689 397 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 FMO5P49326 533 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 PDE1BQ01064 536 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 HHEXQ03014 270 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 RAPSNQ13702 412 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 PTK6Q13882 451 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SIX1Q15475 284 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TAF5Q15542 800 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 GSTA3Q16772 222 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 UGP2Q16851 508 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 BRMS1LQ5PSV4 323 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 PNCKQ6P2M8 343 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CCDC137Q6PK04 289 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 IGFL3Q6UXB1 125 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 Q6ZS46 218 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 MED25Q71SY5 747 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 MRGPRGQ86SM5 289 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC13A5Q86YT5 568 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SFRP1Q8N474 314 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SPATA3Q8NHX4 192 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 HCAR2Q8TDS4 363 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ADAMTS17Q8TE56 1095 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 TM9SF4Q92544 642 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 RELTQ969Z4 430 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SH3KBP1Q96B97 665 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SNF8Q96H20 258 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC2A13Q96QE2 648 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CDC42EP4Q9H3Q1 356 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 WDCPQ9H6R7 721 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 PAPOLBQ9NRJ5 636 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 FGFR1OP2Q9NVK5 253 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ASNSD1Q9NWL6 643 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 EURLQ9NYK6 297 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 UVRAGQ9P2Y5 699 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 DNAJC12Q9UKB3 198 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 FARSAQ9Y285 508 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 EFR3BQ9Y2G0 817 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 LRCH1Q9Y2L9 728 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 MFHAS1Q9Y4C4 1052 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ST14Q9Y5Y6 855 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ALG6Q9Y672 507 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 ABCA4P78363 2273 aa6.67□□□□□ -1.34
SPTLC2-206ENST00000557566 CNTRLQ7Z7A1 2325 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 TRBV23OR9-2A0A075B6M9 112 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 TSPAN11A1L157 253 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 FUCA1P04066 466 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 C8BP07358 591 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 ELFN1P0C7U0 828 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 TAC1P20366 129 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 STX2P32856 288 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 ACVRL1P37023 503 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 ADCY8P40145 1251 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 VHLP40337 213 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 SEPHS1P49903 392 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 CLCN2P51788 898 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 RPS6KA3P51812 740 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 TLE4Q04727 773 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 PTP4A2Q12974 167 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 NFATC2Q13469 925 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 LAMB3Q13751 1172 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 GRM3Q14832 879 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 KYNUQ16719 465 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 FAM91A1Q658Y4 838 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 MTFR2Q6P444 385 aa6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 FAM199XQ6PEV8 388 aaPredicted RBP6.66□□□□□ -1.34
SPTLC2-206ENST00000557566 BRAT1Q6PJG6 821 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms